Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 seq1 122 7e-23 >seq6 Length=1120317 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || |||||||| ||||||||||| || ||||| || | Sbjct 961930 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 961871 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| | || |||||||||||||| || || ||||| | || || || || ||| Sbjct 961870 AGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGA 961811 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| ||||| || || | || | ||||| || | ||| ||| Sbjct 961810 ATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACT 961751 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || ||||| ||||| || ||||| || ||||| Sbjct 961750 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || ||||||||||| ||||| || ||||| || | | Sbjct 962614 CCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAG 962555 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| | || |||||||||||||| || || ||||| | || || || || ||| Sbjct 962554 AGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 962495 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| ||||| || || | || | ||||| || | ||| ||| Sbjct 962494 ATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACT 962435 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || ||||| ||||| || ||||| || ||||| Sbjct 962434 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || ||||| |||||||| ||||| || ||||| |||| Sbjct 961702 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 961643 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| ||||| | || || || || ||| Sbjct 961642 AAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGA 961583 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || ||| || | || | ||||| || | ||| ||| Sbjct 961582 ATACCTTCCTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACT 961523 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || ||||| || || || || || || ||||| Sbjct 961522 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 961476 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || || || ||||| ||||| || ||||| |||| Sbjct 962386 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 962327 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| || || | || || || || ||| Sbjct 962326 AAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGA 962267 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| || || | || | ||||| || | ||| ||| Sbjct 962266 ATACCTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACT 962207 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || || || || || || || || ||||| Sbjct 962206 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160 >seq1 Length=2570408 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || |||||||| || || ||||| || ||||| || | Sbjct 1137214 CCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1137273 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| |||||||||||||| ||||| ||||| | || || || || || Sbjct 1137274 AAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 1137333 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||| || || || ||| | || | ||||| || | || ||| Sbjct 1137334 ATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACT 1137393 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || ||||||||||| || || || || ||||| Sbjct 1137394 TCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278361362856