Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 170 4e-37 seq1 86.0 1e-11 >seq4 Length=1381050 Score = 170 bits (188), Expect = 4e-37 Identities = 552/848 (65%), Gaps = 27/848 (3%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || | ||||| || || |||||||| ||||| || |||| |||||||| ||| Sbjct 294709 TGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTTTCC 294650 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGT--GTCAGGCCCATCTGTTCCAGCA 47957 |||||| ||| ||||||| ||| || | | | || | |||| ||| || Sbjct 294649 ATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA--CCCAAGGCAACCAACA 294592 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || |||||| |||| | ||||| |||| | | ||||||| || | | | Sbjct 294591 ATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACAAGC 294532 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||||||| | |||| || || || || || || ||||| | |||| Sbjct 294531 TGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGATCT 294472 Query 48078 GCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | ||| || || | ||| |||| ||| ||| || | | || ||||| Sbjct 294471 TTTCAACAATGGT---TGGGTTTGGTCTGTTTTGCAAGTG---GGAGAACAACAAGCAGG 294418 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| ||||||| |||||||| || | ||| | | |||||||||| | |||| Sbjct 294417 CAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAG 294358 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| || |||| || | |||||| || | || || || ||||||||||| || | Sbjct 294357 GCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATAC 294298 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 | || || || || || || | || || ||||| |||||| | ||| |||| Sbjct 294297 CTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATCC 294238 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||||| |||||||||||||||||||| || | || ||||| ||| Sbjct 294237 ATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAA-- 294180 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACAT--AGGTA-GTG---AGCAGCTTTGCGTACA 48428 | | | ||| || | | | | | | | ||| ||| | || | ||| Sbjct 294179 ----CAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATAACGAGTAAG 294124 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | || ||||| | || || || ||| ||||| |||||||| |||| ||| | Sbjct 294123 TTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGA 294064 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||||||| | |||||| | || | || || || ||||| || ||||| || |||| Sbjct 294063 CCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAG 294004 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC-ATTCCAG 48607 |||||||||| | || || ||| | ||||||| ||| | ||| |||||| Sbjct 294003 CAAAGAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCA-AGCTGTTCCAG 293945 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 | || |||||| | || ||| | ||||| | |||||||| || || ||||| Sbjct 293944 TCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTC 293885 Query 48668 TTGTACAT 48675 |||||||| Sbjct 293884 TTGTACAT 293877 >seq1 Length=2570408 Score = 86.0 bits (94), Expect = 1e-11 Identities = 198/296 (67%), Gaps = 7/296 (2%) Strand=Plus/Plus Query 213811 TGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCC 213870 ||||||||| |||||||| ||| |||||||||| || ||| ||||| || | |||| Sbjct 2441458 TGACTCTCTTCATGAACAAGTCGGGGACCCACAATCCGTAGAAGAGGTCTCTTGCCCTCA 2441517 Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930 | || || || |||||| || || || | | || || ||||| | ||||| | Sbjct 2441518 TTTCCTCTTTGCCGTGGTTTTTCCGGAGCTCAATCACTTCGAATATGTCGCCATGCCATG 2441577 Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGG 213987 |||||| || | ||||| || || || | ||| |||||| || || || ||||| Sbjct 2441578 GCTCCAAATACACAGCAAACGCACCTGGGCGCTTATTGCCGCCTTGATCGACATACCTGG 2441637 Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCG 214047 | ||||| | |||| | |||||||| ||| | || ||||||| | Sbjct 2441638 CTGTGTCATTGAACACCCGCAACATGGGTACCAATCCGCTTGAGGTACCGTTGGAAGTGG 2441697 Query 214048 CTATATACGAGCCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGG 214101 || | || |||| || || | |||| ||||||| |||||||||||||| Sbjct 2441698 AAATCAAGGACCCGGTTGCTCTAATGTTGTGAACATGGAG--CCCTATGCCACCGG 2441751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532706846720