Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 >seq4 Length=1381050 Score = 172 bits (190), Expect = 1e-37 Identities = 565/866 (65%), Gaps = 37/866 (4%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | ||||||||||| ||| || || |||||||||||||||| | || Sbjct 293865 GAGATCTGGCAAATGTACAAGAAAGCTGAAGCTTCTTTCTGGACCGCCGAAGAGCTCGAC 293924 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-GCTCTATCCAAAGACGAGCAGCATTTTC---T 25589 || || |||| | | |||| || ||| | | | | |||| || | ||| | Sbjct 293925 TTGAGTAAAGACACCCAAGACTGGAACAGCTTGACCGACA-ACGAA-AGATTCTTCATTT 293982 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 | || | | ||||| |||||||| |||||||||||||| || ||||| || || ||| Sbjct 293983 CTAGAA--TCTTGGCCTTCTTTGCTGCCTCTGATGGTATCGTCAACGAAAACTTGGTCGA 294040 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | ||| || ||||||||| | || ||||| ||||||||||||||||| || Sbjct 294041 AAACTTCTCCTCTGAAGTGCAGGTCACTGAAGCCAAATGTTTCTACGGTTTCCAAATCAT 294100 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGA 25766 || ||||| | ||||| || || | | | |||| || ||||| | || Sbjct 294101 GATGGAAAACATCCACTCCGAAACTTA---CTCGTTATTGATTGACACCTACATCAAGGA 294157 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGA 25822 || | || || | | || ||| | |||||||| |||| || ||||||||| Sbjct 294158 --TC-CAAAGGAAGCT-GACTTCTTGTTCAACGCCATCGACAACATCCCATGCATCAAGA 294213 Query 25823 GGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGC 25882 |||||| ||||| ||| ||||| | | | |||| ||| || || | Sbjct 294214 AGAAGGCCGACTGGGCTTTGAGATGGATTAGTGACGACGACGCTTTGTTCGGTGAAAGAT 294273 Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||| |||||||| || || || || || || ||| ||||| ||||| | ||||||| Sbjct 294274 TGGTTGCCTTTGCCGCCGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCTATCTTCT 294333 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGG 26001 || | ||| ||| || | ||| || |||| ||||| ||||||||| | ||| | | Sbjct 294334 GGTTGAAGAAGAGAGGTAAGATG-CCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGT 294392 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAA 26061 ||||| ||| | |||| || ||||||||| || | | | | |||||||| ||| | Sbjct 294393 GACGAAGGTTTGCACACCGACTTTGCCTGCTTGTTGTTCTC---CCACTTGCAAAACAGA 294449 Query 26062 CCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 || | | | || | | ||||| | || ||||| ||||| || || || Sbjct 294450 CCAAACCCAACCATTGTTGAAAAGATCATTACCGAAGCTGTTTCCATCGAAAAAGAATTC 294509 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC-TCATGAGCCAATA 26180 |||| |||||||| ||| | ||| ||||||| Sbjct 294510 TTCACCGATGCTTTGCCATGCAGCTTGTTGGGTATGAACAA-GGACTTGATGTGCCAATA 294568 Query 26181 CATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGT 26238 | |||||| || |||||| || || |||| |||| || | |||||| Sbjct 294569 CGTTGAGTTCGTCGCCGACAGATTGTTGGTTGCC--TTGGGTAACGAAAAGTTCTACA-- 294624 Query 26239 ACG--CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCT 26296 ||| | ||||| |||||||| ||||||||||| || |||| || ||||||||||||| Sbjct 294625 ACGTCACCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCT 294684 Query 26297 TTGAAAAGAGGGTCGGCGACTATCAA 26322 | |||||||| ||| | || || ||| Sbjct 294685 TCGAAAAGAGAGTCAGTGATTACCAA 294710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520