Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 118 5e-22 seq1 82.4 4e-11 >seq4 Length=1381050 Score = 118 bits (130), Expect = 5e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||| | ||||| ||||| || ||| || | ||| |||||||| | || || Sbjct 121538 CCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAA 121597 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | |||||| ||||| ||||||||||| |||||||||||| | | || | ||||||||| Sbjct 121598 AAGATCTCTTGCTCTGATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAA 121657 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 || || |||||||| ||||| || || | || ||| ||| ||| || ||||| Sbjct 121658 GATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACC 121717 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 ||| || ||||| | ||||| | ||||| || Sbjct 121718 TTGGTCAACGTAACGGGCAGTGTTGTTGAACAC 121750 >seq1 Length=2570408 Score = 82.4 bits (90), Expect = 4e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTG-ATAAGTTTGAAGTGAATGGTTCAAAACATT 25073 ||||||||| ||||| ||||||| |||| ||| ||| ||||| || ||||||||||| | Sbjct 2440565 AAATTCTCCCGACAAGACTCTTCG-ATTGTATATGTTGGAAGTCAAAGGTTCAAAACACT 2440623 Query 25074 CATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAAT 25133 | || ||| | |||||||| || || || || |||||| || | | | ||| | Sbjct 2440624 CGTTGAATCCGAGAATTTGAGATGTGGACGCAGTGGGCATTGGGGCAACAAGCAACGAGT 2440683 Query 25134 TTCTCAAACCAT 25145 ||||||| |||| Sbjct 2440684 TTCTCAAGCCAT 2440695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600