Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq6 132 9e-26
seq1 123 4e-23
>seq6
Length=1120317
Score = 132 bits (146), Expect = 9e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 962167 ATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTG 962108
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | |||||| || || |||||||| |||||||| || ||||| || ||
Sbjct 962107 TAGTCAGAAAGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGG 962048
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| || |||| ||| | || ||| || ||||||
Sbjct 962047 TCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAA 961988
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| ||| || || ||||| || | || || || || ||||||||
Sbjct 961987 GATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Score = 122 bits (134), Expect = 2e-22
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 961711 ATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTG 961652
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || ||||| || |||||||| || ||||| || ||
Sbjct 961651 TAGTCGGACAAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGG 961592
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| || |||| ||| | || || || ||||||
Sbjct 961591 TCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAA 961532
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
|| || ||||| | || || || ||||| || | || || || || ||||||||||||
Sbjct 961531 GATTCGACTTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTTA 961472
Score = 114 bits (126), Expect = 2e-20
Identities = 167/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || | || | ||||| || ||
Sbjct 961939 ATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTG 961880
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | ||||| || || ||||| || || || ||||| ||||| || ||
Sbjct 961879 TAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGG 961820
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| ||||| | || | || || || ||||||
Sbjct 961819 TCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAA 961760
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| ||| || || ||||| || | || || ||||| ||||||||
Sbjct 961759 GATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 111 bits (122), Expect = 3e-19
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || | || | || || || ||
Sbjct 962395 ATTTGCATACCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTG 962336
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || ||||| || |||||||| |||||||| || ||
Sbjct 962335 TAGTCGGACAAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGG 962276
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| ||||| | || | || || || ||||||
Sbjct 962275 TCTGGTGGAATACCTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAA 962216
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || || || ||||| || | || || || || ||||||||
Sbjct 962215 GATTCGACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 102 bits (112), Expect = 1e-16
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||||| ||||||||||||| | |||| || | |||| || || || ||
Sbjct 962623 ATTTATTGGCCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTG 962564
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | ||||| || || ||||| || || || || || ||||| || ||
Sbjct 962563 TAGTCAGAGAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 962504
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| ||||| | || | || || || |||||
Sbjct 962503 TCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAG 962444
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| ||| || || ||||| || | || || ||||| ||||||||
Sbjct 962443 GATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
>seq1
Length=2570408
Score = 123 bits (136), Expect = 4e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | || | ||| || || || ||||| ||
Sbjct 1137213 ACCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGA 1137272
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || |||||||| || ||||| || || || || ||
Sbjct 1137273 CAAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 1137332
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| || |||| || | ||| || || ||||| ||||| ||
Sbjct 1137333 GATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 1137392
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| | || || || ||||| |||| || || || || |||||||| ||
Sbjct 1137393 TTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 1137443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654310034560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |