Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 6e-27
seq1 120 4e-22
>seq6
Length=1120317
Score = 136 bits (150), Expect = 6e-27
Identities = 186/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 155798 TTATAATAAA--AATTTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAA 155855
||||||| || ||| || | |||||||||||| || | || || ||||| || ||
Sbjct 961449 TTATAATCAACTAATACATCAATTAAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAG 961508
Query 155856 ACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAA 155915
|| ||||| || ||||||||| ||| || | || ||||| ||| || || |||
Sbjct 961509 ACCATTACCTTGGAAGTCGAATCTTCCGACACCATCGACAACGTTAAATCCAAGATCCAA 961568
Query 155916 GATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAA 155975
|| || ||||| || || ||||| || ||||||||||| | |||||||||||| | |||
Sbjct 961569 GACAAGGAAGGTATTCCACCAGACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAA 961628
Query 155976 GATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGT 156033
|| |||||| || || || || | | ||||||| || | || ||||| || || |
Sbjct 961629 GACGGCAGAACCTTGTCCGACTACA--ACATCCAAAAGGAATCTACTCTTCACTTGGTCT 961686
Query 156034 TAAGATTAAGAGGCGGT 156050
| ||||| ||||| |||
Sbjct 961687 TGAGATTGAGAGGTGGT 961703
Score = 131 bits (144), Expect = 2e-25
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || |||||||| || || ||||| || ||||||||| |||
Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || |||||| ||||| || ||||| || || ||||| ||
Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||||| || | |||||||||||| | ||||| |||||| || || || || |
Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACA-- 962337
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || || || || || || ||||| ||||| |||
Sbjct 962338 ACATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGGT 962387
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || || || || || |||||||| ||| |||
Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || |||||| ||||| || ||||| || || ||||| ||
Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| || |||||||| | ||||| ||||||| | || || || ||
Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || ||||| || || || ||||| ||||| |||
Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 961931
Score = 122 bits (134), Expect = 1e-22
Identities = 166/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || ||||| || || || || || |||||||| ||| |||
Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| ||| || || ||||| || ||||| || || ||||| ||
Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||||||||| || | ||||| |||||| | || || || |
Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACA-- 962109
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || || ||||| ||||| |||
Sbjct 962110 ACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGT 962159
Score = 111 bits (122), Expect = 2e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || || || || || |||||||| ||| ||
Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || |||||| ||||| || ||||| || || ||||| ||
Sbjct 962448 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 962507
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| | ||||| ||||||| | || || || |
Sbjct 962508 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACA-- 962565
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
| ||||||| || | || || || || || || ||||| ||||| ||
Sbjct 962566 ACATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGG 962614
>seq1
Length=2570408
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || || ||||| || ||||||||
Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | || || || || || || ||||| |||||||| || || |||||
Sbjct 1137383 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGAC 1137324
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| ||||||||||| | |||||||||||| | |||||| ||||| || || || ||
Sbjct 1137323 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTAC 1137264
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| | || ||||| || ||||| ||||| ||||| ||||
Sbjct 1137263 A--ACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGGTG 1137212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871926812800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |