Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 7e-23
seq4 116 1e-20
seq2 91.5 4e-13
>seq1
Length=2570408
Score = 123 bits (136), Expect = 7e-23
Identities = 122/157 (78%), Gaps = 3/157 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | || |||||||||||| ||| ||||| |||||| | |||||| |||
Sbjct 483155 AGAATTTCCTTAAGACGGGGAACACCCAAGGTGACGTT---CTTGGAGGAAACACCGGCA 483211
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| |||||||| |||| || | ||||||| |||||||||||| |||||| |||||
Sbjct 483212 TAATGGAAAGTGTTCAATGTCATCTGAGTAGCAGGCTCACCAATAGATTGTGCGGCAATA 483271
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTTCT 301969
| |||||||||||| || || ||||| |||||||
Sbjct 483272 ACACCAACCATTTCACCAGGATGAACAATCGACTTCT 483308
Score = 100 bits (110), Expect = 8e-16
Identities = 199/292 (68%), Gaps = 2/292 (1%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| || ||| || ||||||| | || | ||||||||||| |||||||||||
Sbjct 483913 ATCATAATGAACCATGATATCTTCCAAAGCTTTAACCAAACGACGCTGGATATAACCAGT 483972
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | ||||| || || |||||||| ||||| | | ||| ||||||| ||||||||
Sbjct 483973 TTCTGCAGTTTTCACGGCGGTATCAATAAGACCTTCTCTACCGGCCATAGCGTGGAAGAA 484032
Query 302673 TAGCTCTTCCGGTCGTAGCCC-CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| |||| || | ||| | ||| || ||| ||||||||||||| | ||| |
Sbjct 484033 GAATTCTTGAGGAGTCAACCCTCTCAAGTAA-GAGTTCTCAACGAAACCTTTGGACTCAG 484091
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || | || || || || || |||| | | | || | || | || ||||
Sbjct 484092 GAGAGTAATCATCTTTAGTGAAATGAGGCAACGAACGATCAGCAAAACCAAAAGGAATAC 484151
Query 302792 GCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||| || ||||| | || || |||| || | | ||| |||||||| ||
Sbjct 484152 GCTTACCTTCAACAATTTGTTGACCCACACAGGCAGACATTTGCGAAATGTT 484203
>seq4
Length=1381050
Score = 116 bits (128), Expect = 1e-20
Identities = 456/708 (64%), Gaps = 23/708 (3%)
Strand=Plus/Plus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
||||| ||||| |||||||||| ||| ||| ||||||| | || || ||||| |||||
Sbjct 121278 TATTCAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTG 121337
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
| || ||||||||||||| ||||| | ||| |||| || || || || | |||||
Sbjct 121338 GTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCT 121397
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCGA 155809
|||| || ||| | | | || |||| | |||| || |||| |||
Sbjct 121398 TCCAAGATGGAGTACCACAATTTTTGTGCCTTAA-CAGTTTGTCTGCCTCTGTTTTCTCT 121456
Query 155810 CTC--ATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
|| || |||| || | | |||| | | || ||||||||| |||| || |||||
Sbjct 121457 TTCGTATCTTTCGTACA-ATTGTTC-GAATTCGTCACCGTAAACATCAGCCAAGCCAGGA 121514
Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT------ACACGCTCCATA 155921
|| | || | || || | ||| | |||| || ||||||| |||
Sbjct 121515 GCCTCGTTAGGAGAGAAAAGGGTCCA------CTCACCGTTTTGTTCAACACGCTTCATG 121568
Query 155922 AATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCC 155980
|| | |||| ||||| || |||||| || |||| || ||| || || | ||
Sbjct 121569 AAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTG-CTCTGATTTCTTCTTTACC 121627
Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040
||||||||| | | || | ||| || || || | || || |||| ||||
Sbjct 121628 GTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAA 121687
Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097
|| ||| |||| |||||| ||||| || || || || || ||||| || |||||
Sbjct 121688 GGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAA 121747
Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157
|||| | |||||| || ||||| ||||| || || ||||| || ||| | | |||
Sbjct 121748 CACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACC 121807
Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGC 156217
|| || | || || || || | ||||||||||| | | || || || |||
Sbjct 121808 AGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGC 121867
Query 156218 GCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATA 156277
|| || | ||| | | | ||||| || || || || |||| ||| | | || |
Sbjct 121868 ACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAA 121927
Query 156278 GCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
|| || | |||||| || || || |||||||| || |||||
Sbjct 121928 ACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGG 121975
>seq2
Length=2224902
Score = 91.5 bits (100), Expect = 4e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
||||||||| |||||||||||||| | |||||||||||| | ||||| ||||||||| |
Sbjct 1875575 AGCACCGTGTGCAATCATACAATCTCTTTCCATTTCACCGAAACGCAAACCACCATCTCT 1875634
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAAC 233364
|||||||| | |||| ||| | ||||| ||
Sbjct 1875635 GGACCTACCTTCCACTGGTTGTCTCGTTAACAC 1875667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |