Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 4e-33
seq4 116 5e-20
seq6 111 2e-18
>seq5
Length=1257524
Score = 159 bits (176), Expect = 4e-33
Identities = 287/417 (69%), Gaps = 2/417 (0%)
Strand=Plus/Plus
Query 18067 ACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGC 18126
|| || |||| | | || | ||||| || | |||||||| ||| | | |||||
Sbjct 609653 ACTTTTGGCACGCTTTTCCGCGTCACTACTTACGGCGAGTCCCACTGCAAGTCTGTCGGG 609712
Query 18127 TGCATCATCGACGGCGTGCCG-CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCA 18185
|| || | ||||| ||||| ||| || | | || |||||||||| |||||||| ||
Sbjct 609713 TGTATTGTGGACGG-GTGCCCTCCGGGCCTCGCTCTCACCGAGGCCGATATCCAGCCACA 609771
Query 18186 GTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCG 18245
||| ||| | ||||||||||| || |||||| || || | |||||| || |
Sbjct 609772 ATTGAGTCGAAGAAGACCGGGCCAGAGCAAACTTTCAACCCCAAGAAACGAGAAAGACCA 609831
Query 18246 CGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTT 18305
||| ||||||||||| || ||||||||| | || |||||||| ||| | | | | ||
Sbjct 609832 GGTCCATATCCAGTCGGGTACCGAGAACGGCTTGACCCTCGGCTCCCCCATTGCCATGTT 609891
Query 18306 TGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCC 18365
||| |||| ||||| | ||| |||||| || || | | || | ||
Sbjct 609892 GGTGCAGAACCAGGACCACAGACCCAACGACTACTCAGAAACCGACTTATACCCAAGACC 609951
Query 18366 CTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGG 18425
||| ||||| |||| || ||||| || ||||||| |||| | || || || ||
Sbjct 609952 CTCCCACGCAGACTGGACTTACATCCAGAAATACGGCACCAAGCTGAGCTCTGGTGGCGG 610011
Query 18426 CCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
||| ||||| ||||| |||||| || || || || |||||||| ||||||||||
Sbjct 610012 CCGCTCGTCGGCCCGTGAGACCATCGGCCGTGTTGCAGCCGGCGCCATCGCCGAGAA 610068
>seq4
Length=1381050
Score = 116 bits (128), Expect = 5e-20
Identities = 182/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| || || |||| ||| || || |||| ||| || | || ||||||||
Sbjct 121719 TGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAG 121778
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184
|||||||| || || | ||| || || | || | ||||| | ||||| ||
Sbjct 121779 GTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAA-CC 121837
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || ||||| ||||||||||| | || || ||| | ||||||||||| || ||
Sbjct 121838 AATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTC 121897
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||||||||| | |||||| | || || || || ||||| |||| || | || ||
Sbjct 121898 GATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACC 121957
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
||||||||| || || ||
Sbjct 121958 GGCGTTGAAAAGAGTAGG 121975
>seq6
Length=1120317
Score = 111 bits (122), Expect = 2e-18
Identities = 389/595 (65%), Gaps = 12/595 (2%)
Strand=Plus/Plus
Query 1852044 CGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGA 1852103
|||| |||||| || ||| ||| ||||||||||||| || | | ||| || | |
Sbjct 263009 CGATTTTGGAGTTGGGATCGGAGGCACTCATCTTGCCGCCCTGGCCCAAGCCGGGGATCA 263068
Query 1852104 GCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAA 1852163
||||| | || |||| | |||| ||||||| | ||| || || || |
Sbjct 263069 TGGGGTTCATCAAGTGGGCTCTCTTCTTGTAGCCGATACCTTGCAAGTTTTCTTCGGCCA 263128
Query 1852164 AGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCT 1852223
| | || ||||| | ||||||| |||||||||||| | ||||| | | || ||||
Sbjct 263129 ACACGAAAATCTTTCTCTGGTCGACACCGCCAAACTGGACATCGACCCCCAAGTAGTGCT 263188
Query 1852224 CGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCT 1852283
|||| | || ||||| | |||||| | || | | | |||||| || ||
Sbjct 263189 CGTCCAATGCTTGCATCAACGGGTAAATCAACCCGGATAACAATGGGTTGGCCACCTGCT 263248
Query 1852284 TGACCACCTGAGCGGCGGC-CTTTT-GCGCCGTGCCGGTGCG-CACGTGCGCCGCGAGTC 1852340
||||||| | ||| |||| ||||| ||| ||| | |||| ||| | || |
Sbjct 263249 TGACCACGTCGGCGCCGGCTCTTTTGGCGTCGTTC---TGCGACACTTTGTTCGACAACT 263305
Query 1852341 GGTAGAGGTCGAGCGCGTAGGCGCCGCCGC-ACTGGTACTCGGTGCCGCGCACAAAC-TC 1852398
| ||||||| | || |||| || | | || ||||||| |||| ||| ||| ||| ||
Sbjct 263306 TGAAGAGGTCCAACGTGTAGTCGGC-CTGCAACTGGTAGTCGGAGCCCAACACGAACTTC 263364
Query 1852399 GAGTCCGCCCAGCGGCACGCCGA-TGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACC 1852457
| | | | | || ||| | | || | | || |||||||||| | || |||||
Sbjct 263365 AACTTC-TCGATGGGGACGTCAATTGAGGTCAAG-ATGGCCTTGACGACATTTTCGTAGT 263422
Query 1852458 AGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCA 1852517
| | || ||||| ||| | ||| | |||| ||| |||||| | || || ||||
Sbjct 263423 ACTTGGCCCTGTGTTTGACAACCTCCAAAGGCGCCTTCATGTTGTCCAAGTACGCATGCA 263482
Query 1852518 CGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGA 1852577
||| || | | | | ||| |||||||||| | |||| ||||| |||| |
Sbjct 263483 AGTCTGCCACCAACACAGTCACCTCGCAGCCGGCCTTCAAGAAGTGGGCCAACTTGATCA 263542
Query 1852578 TGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATAT 1852632
||| ||||||||| || ||| || ||||| || || || || ||||| || ||
Sbjct 263543 TGGCCACAAAGTACCCACAGTGGGGTTTGCCGGTTGGTGCTGTACCCCAGTAGAT 263597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138543482536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |