Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 159 4e-33 seq4 116 5e-20 seq6 111 2e-18 >seq5 Length=1257524 Score = 159 bits (176), Expect = 4e-33 Identities = 287/417 (69%), Gaps = 2/417 (0%) Strand=Plus/Plus Query 18067 ACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGC 18126 || || |||| | | || | ||||| || | |||||||| ||| | | ||||| Sbjct 609653 ACTTTTGGCACGCTTTTCCGCGTCACTACTTACGGCGAGTCCCACTGCAAGTCTGTCGGG 609712 Query 18127 TGCATCATCGACGGCGTGCCG-CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCA 18185 || || | ||||| ||||| ||| || | | || |||||||||| |||||||| || Sbjct 609713 TGTATTGTGGACGG-GTGCCCTCCGGGCCTCGCTCTCACCGAGGCCGATATCCAGCCACA 609771 Query 18186 GTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCG 18245 ||| ||| | ||||||||||| || |||||| || || | |||||| || | Sbjct 609772 ATTGAGTCGAAGAAGACCGGGCCAGAGCAAACTTTCAACCCCAAGAAACGAGAAAGACCA 609831 Query 18246 CGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTT 18305 ||| ||||||||||| || ||||||||| | || |||||||| ||| | | | | || Sbjct 609832 GGTCCATATCCAGTCGGGTACCGAGAACGGCTTGACCCTCGGCTCCCCCATTGCCATGTT 609891 Query 18306 TGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCC 18365 ||| |||| ||||| | ||| |||||| || || | | || | || Sbjct 609892 GGTGCAGAACCAGGACCACAGACCCAACGACTACTCAGAAACCGACTTATACCCAAGACC 609951 Query 18366 CTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGG 18425 ||| ||||| |||| || ||||| || ||||||| |||| | || || || || Sbjct 609952 CTCCCACGCAGACTGGACTTACATCCAGAAATACGGCACCAAGCTGAGCTCTGGTGGCGG 610011 Query 18426 CCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||| ||||| ||||| |||||| || || || || |||||||| |||||||||| Sbjct 610012 CCGCTCGTCGGCCCGTGAGACCATCGGCCGTGTTGCAGCCGGCGCCATCGCCGAGAA 610068 >seq4 Length=1381050 Score = 116 bits (128), Expect = 5e-20 Identities = 182/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| || || |||| ||| || || |||| ||| || | || |||||||| Sbjct 121719 TGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAG 121778 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184 |||||||| || || | ||| || || | || | ||||| | ||||| || Sbjct 121779 GTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAA-CC 121837 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| ||||||||||| | || || ||| | ||||||||||| || || Sbjct 121838 AATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTC 121897 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| | |||||| | || || || || ||||| |||| || | || || Sbjct 121898 GATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACC 121957 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| || || || Sbjct 121958 GGCGTTGAAAAGAGTAGG 121975 >seq6 Length=1120317 Score = 111 bits (122), Expect = 2e-18 Identities = 389/595 (65%), Gaps = 12/595 (2%) Strand=Plus/Plus Query 1852044 CGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGA 1852103 |||| |||||| || ||| ||| ||||||||||||| || | | ||| || | | Sbjct 263009 CGATTTTGGAGTTGGGATCGGAGGCACTCATCTTGCCGCCCTGGCCCAAGCCGGGGATCA 263068 Query 1852104 GCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAA 1852163 ||||| | || |||| | |||| ||||||| | ||| || || || | Sbjct 263069 TGGGGTTCATCAAGTGGGCTCTCTTCTTGTAGCCGATACCTTGCAAGTTTTCTTCGGCCA 263128 Query 1852164 AGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCT 1852223 | | || ||||| | ||||||| |||||||||||| | ||||| | | || |||| Sbjct 263129 ACACGAAAATCTTTCTCTGGTCGACACCGCCAAACTGGACATCGACCCCCAAGTAGTGCT 263188 Query 1852224 CGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCT 1852283 |||| | || ||||| | |||||| | || | | | |||||| || || Sbjct 263189 CGTCCAATGCTTGCATCAACGGGTAAATCAACCCGGATAACAATGGGTTGGCCACCTGCT 263248 Query 1852284 TGACCACCTGAGCGGCGGC-CTTTT-GCGCCGTGCCGGTGCG-CACGTGCGCCGCGAGTC 1852340 ||||||| | ||| |||| ||||| ||| ||| | |||| ||| | || | Sbjct 263249 TGACCACGTCGGCGCCGGCTCTTTTGGCGTCGTTC---TGCGACACTTTGTTCGACAACT 263305 Query 1852341 GGTAGAGGTCGAGCGCGTAGGCGCCGCCGC-ACTGGTACTCGGTGCCGCGCACAAAC-TC 1852398 | ||||||| | || |||| || | | || ||||||| |||| ||| ||| ||| || Sbjct 263306 TGAAGAGGTCCAACGTGTAGTCGGC-CTGCAACTGGTAGTCGGAGCCCAACACGAACTTC 263364 Query 1852399 GAGTCCGCCCAGCGGCACGCCGA-TGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACC 1852457 | | | | | || ||| | | || | | || |||||||||| | || ||||| Sbjct 263365 AACTTC-TCGATGGGGACGTCAATTGAGGTCAAG-ATGGCCTTGACGACATTTTCGTAGT 263422 Query 1852458 AGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCA 1852517 | | || ||||| ||| | ||| | |||| ||| |||||| | || || |||| Sbjct 263423 ACTTGGCCCTGTGTTTGACAACCTCCAAAGGCGCCTTCATGTTGTCCAAGTACGCATGCA 263482 Query 1852518 CGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGA 1852577 ||| || | | | | ||| |||||||||| | |||| ||||| |||| | Sbjct 263483 AGTCTGCCACCAACACAGTCACCTCGCAGCCGGCCTTCAAGAAGTGGGCCAACTTGATCA 263542 Query 1852578 TGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATAT 1852632 ||| ||||||||| || ||| || ||||| || || || || ||||| || || Sbjct 263543 TGGCCACAAAGTACCCACAGTGGGGTTTGCCGGTTGGTGCTGTACCCCAGTAGAT 263597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138543482536