Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq6 125 6e-24 seq1 122 7e-23 >seq6 Length=1120317 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 107551 TTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGG 107610 |||||||||||||||| ||||| || || || || || ||||||||| | ||| || Sbjct 961471 TTAAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAAT 961530 Query 107611 CTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGG 107670 || ||| || ||| | | || ||| ||||| || || ||||| | || | Sbjct 961531 CTTCCGACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCAG 961590 Query 107671 ATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACT 107730 | ||||| ||| | || | ||| ||||| || |||| |||| || ||| || | |||| Sbjct 961591 ACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACT 961650 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 961651 ACAACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 961702 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || || || || || ||||||||| | ||| || || | Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || ||| || || ||||| | || || ||| Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| || |||| |||| || ||| || | ||||||||| Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 962339 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || | ||| |||| ||||||||| |||| || Sbjct 962340 ATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 962386 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| ||||| || || || ||||| || | ||| || || | Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || || || || ||||| | || || ||| Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || ||||| || |||| |||| || ||| | | ||||||||| Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| || || || | ||| |||| ||||||||| |||| || Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 961930 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || || || || || ||||| || | ||| || || | Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| ||||| || || ||||| | || || ||| Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| |||||||| |||| |||| | ||| | | ||||||||| Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 962111 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 962112 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 962158 >seq1 Length=2570408 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| ||||| |||||||| || || ||||||||| | ||| ||| | Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || ||| | | || || ||||| || |||||||| | || || Sbjct 1137383 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGAC 1137324 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 ||||| ||| | || | ||| ||||| || |||| || | | ||| || | |||||| Sbjct 1137323 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTAC 1137264 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||||||||| || | ||| |||||||||||||| |||| || Sbjct 1137263 AACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876761109512