Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq4 141 9e-29
seq6 96.9 3e-15
seq1 86.0 6e-12
>seq4
Length=1381050
Score = 141 bits (156), Expect = 9e-29
Identities = 352/521 (68%), Gaps = 19/521 (4%)
Strand=Plus/Plus
Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256
||||||| |||| || || || || | || |||| ||| ||||| |||| |||||
Sbjct 294181 TCAACGCCATCGACAACATCCCATGCATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGA 294240
Query 50257 CTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGT 50315
|| || | | ||| || || ||| | || || || |||||| || ||||||
Sbjct 294241 TTAGTGACGACGACGCTTTGTTCGGT-GAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGT 294299
Query 50316 GTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCC 50375
| || || || ||| |||||| | || || | | || | ||| | |||||
Sbjct 294300 ATTTTCTTCTCTGGTTCCTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCT 294359
Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435
||| | || || |||||||||||| | || |||||||| ||||||| ||||||||
Sbjct 294360 GGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCACACCGACTTTGCC 294419
Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATG 50495
|| |||| | | | | | | | ||| | || || ||| ||| | || | |
Sbjct 294420 TGCTTGTTGTTCT---CCCACTTGCA---AAACAGACCAAACCCAACCATTGTTGAAAAG 294473
Query 50496 TTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACC-CGTGGC 50551
||| ||||| || |||||||||||| || ||||| || ||||| || | ||
Sbjct 294474 ATCATTACCGAAGCTGTTTCCATCGAAAAAGAATTCTTCACCGATGCTTTGCCATGCAGC 294533
Query 50552 ATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATT 50611
|||||||| |||||| ||| |||||||| | ||| ||||||| || || ||||||||
Sbjct 294534 -TTGTTGGGTATGAACAAGGACTTGATGTGCCAATACGTTGAGTTCGTCGCCGACAGATT 294592
Query 50612 GTT-GTTGCAGCTGGGACAACCGAAA-TACTATAATG-CACGTAACCCCTTTCCGTTTAT 50668
||| ||||| || || ||| ||| | ||| || | ||| ||||| || || ||
Sbjct 294593 GTTGGTTGC--CTTGGGTAACGAAAAGTTCTACAACGTCAC-CAACCCATTCGACTTCAT 294649
Query 50669 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50709
| | ||||| || |||| || || || ||||| |||||||
Sbjct 294650 GGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTCGAAA 294690
>seq6
Length=1120317
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || |||| || ||||||||||| |||||||| ||
Sbjct 961930 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 961871
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||| | ||| |||||||| | |||| | |||||| || || ||
Sbjct 961870 AGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGA 961811
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| ||||| ||||| || | | || | ||||| | | ||| |||
Sbjct 961810 ATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACT 961751
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | ||||| |||||||| || || || || |||||||||
Sbjct 961750 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCATA 961703
>seq1
Length=2570408
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || |||| || || || ||||| |||||||| || |
Sbjct 1137214 CCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1137273
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || ||||| | ||| ||||| ||| |||||| | |||||| || || ||
Sbjct 1137274 AAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 1137333
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||||||||| || || || | | || | ||||| | || || |||
Sbjct 1137334 ATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACT 1137393
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | ||||| ||||| || || || ||||| ||||||||
Sbjct 1137394 TCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543951145600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |