Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 102 8e-17 >seq4 Length=1381050 Score = 102 bits (112), Expect = 8e-17 Identities = 208/305 (68%), Gaps = 12/305 (4%) Strand=Plus/Plus Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGA---CGCCAAGCAAAAAACACGAACACATTTG 148166 |||||| |||||||| ||| | ||| | || |||| ||| || |||| |||||| Sbjct 121886 GTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGA---CATTTG 121942 Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 ||| | || || || |||||| || || | |||| || || | ||||| Sbjct 121943 AGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAGA 122002 Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286 ||| | | || ||||||||| | |||||||||||| ||||| || || | ||||| Sbjct 122003 CATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACAGCGAC 122062 Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGA-TCTTGAGAAG--ATA 148343 | ||||| || |||||| |||| ||| || |||| ||||| ||| | ||| | | Sbjct 122063 TCTCATGATCAAGTGCTGAGGTCTTTCAGCGACTTTGCCGTTGATTCTCAACAAGTAAGA 122122 Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGAT 148403 || |||| | || ||| |||| ||||| ||||| | || || | ||| || | || Sbjct 122123 TC---TTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAGTCACGGTCGAAAACAAT 122179 Query 148404 GGCCG 148408 ||||| Sbjct 122180 GGCCG 122184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611152338880