Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 107 3e-17 >seq4 Length=1381050 Score = 107 bits (118), Expect = 3e-17 Identities = 376/574 (66%), Gaps = 30/574 (5%) Strand=Plus/Plus Query 1455755 TTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTG 1455814 ||||| || | ||||| ||| ||| |||||||| | |||| | || || || || || Sbjct 293847 TTCCCTCTCAGATACCACGAGATCTGGCAAATGTACAAGAAAG-CTGAAGCTTCTTTCTG 293905 Query 1455815 GACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGA 1455874 ||||||||| ||| ||||| | | ||||| ||||| ||| |||| | Sbjct 293906 GACCGCCGAAGAGCTCGACTTGAGTAAAGACACCCAAGACTGGAACAGCTTGACCGACAA 293965 Query 1455875 CGAGCGCCATTTCAT--CAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 ||| | ||||| | || | || | ||||| ||| || ||| ||||| ||||| Sbjct 293966 CGAAAGATTCTTCATTTCTAGAA--TCTTGGCCTTCTTT-GCTGCCTCTGATGGTATCGT 294022 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTT----TATGAAAGAGGTCCAATTGCCAGAGGCACGTT 1455988 ||| ||| ||| || ||| | |||| || || | | || || | Sbjct 294023 CAACGAAAACTTGGTCGAAAACTTCTCCTCTGAA----GTGCAGGTCACTGAAGC-CAAA 294077 Query 1455989 TGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTG 1456047 ||||| ||||| ||||| ||| || |||||||||||||| ||||| |||||| | || Sbjct 294078 TGTTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACTTACTCGTTATTG 294137 Query 1456048 ATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACG 1456107 || ||||||||| ||||||| || || ||| | | || ||||||||||| Sbjct 294138 ATTGACACCTACATCAAGGATCCAAAGGAAGCTGACTTCTTGTTCAACGCCATCGACAAC 294197 Query 1456108 GTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTC 1456167 | || | | | ||| |||||||||||||| ||| ||||| | | || | Sbjct 294198 ATCCCATGCATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGATTAGTGACGA------C 294251 Query 1456168 GACACTTT----GCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCG 1456222 ||| |||| | || | | || | |||||||| |||||| || || || ||||| Sbjct 294252 GACGCTTTGTTCGGTGAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGTATTTTCTTCTCT 294311 Query 1456223 GGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCT 1456281 || || ||| | ||||| ||| | |||||| | || ||||| || ||| | Sbjct 294312 GGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCTGG-CTTGACTT 294369 Query 1456282 TTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315 | |||||| || ||| |||| ||||||| ||| Sbjct 294370 TCTCCAACGAGTTGATCTGTCGTGACGAAGGTTT 294403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810428385296