Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 145 8e-30 seq6 140 3e-28 >seq1 Length=2570408 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || ||||| |||||||| ||||||||||| | | Sbjct 1137214 CCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1137273 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | ||||| || || || Sbjct 1137274 AAGGTTCTACCA-TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 1137332 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || || ||||| ||| | |||||||| || || || Sbjct 1137333 GATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 1137392 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | |||||||| |||||||||||||| || |||||||||||||| ||| Sbjct 1137393 TTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 1137444 >seq6 Length=1120317 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | ||| || || ||||||||||| |||||||||||| | Sbjct 961702 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 961643 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || ||| || | || || || ||||| ||||| | ||||| || || || Sbjct 961642 AAGGTTCTGCC-GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 961584 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||| || ||| | |||||||| ||||| || Sbjct 961583 AATACCTTCCTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGAC 961524 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | |||||||| |||||||| || || || ||||||||||||||||| Sbjct 961523 TTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTT 961473 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| || || ||||||||||| ||||||||||| | Sbjct 962158 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 962099 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||||| || ||||| ||||| | ||||| || || || Sbjct 962098 AGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 962039 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || |||||| ||| | |||||||| ||||| || Sbjct 962038 ATACCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACT 961979 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| |||||||| || || |||||||| |||||||| Sbjct 961978 TCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | ||| || |||||||||||||| |||||||||||| | Sbjct 962386 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 962327 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || ||| || | || || || ||||| || || | ||||| || || || Sbjct 962326 AAGGTTCTGCC-GTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGG 962268 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| ||||| ||| | |||||||| ||||| || Sbjct 962267 AATACCTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGAC 962208 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||| ||||| || || || |||||||| |||||||| Sbjct 962207 TTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| || |||||||| ||||| ||||||||||| | Sbjct 961930 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 961871 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | || || || || |||||||| | ||||| || || || Sbjct 961870 AGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGA 961811 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| ||||| ||||| ||| | |||||||| ||||| || Sbjct 961810 ATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACT 961751 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| |||||||| ||||| || || || |||||||| Sbjct 961750 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| || || ||||||||||| ||||||||||| | Sbjct 962614 CCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAG 962555 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | || ||| || | || || || || || ||||| | ||||| || || || Sbjct 962554 AGAGTTCTG-CCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGG 962496 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| ||||| ||||| ||| | |||||||| ||||| || Sbjct 962495 AATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 962436 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| |||||||| ||||| || || || |||||||| Sbjct 962435 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398349460160