Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 8e-30
seq6 140 3e-28
>seq1
Length=2570408
Score = 145 bits (160), Expect = 8e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| || ||||| |||||||| ||||||||||| | |
Sbjct 1137214 CCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1137273
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || ||||| ||||| | ||||| || || ||
Sbjct 1137274 AAGGTTCTACCA-TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 1137332
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || ||||| ||| | |||||||| || || ||
Sbjct 1137333 GATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 1137392
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | |||||||| |||||||||||||| || |||||||||||||| |||
Sbjct 1137393 TTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 1137444
>seq6
Length=1120317
Score = 140 bits (154), Expect = 3e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | ||| || || ||||||||||| |||||||||||| |
Sbjct 961702 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 961643
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || ||||| ||||| | ||||| || || ||
Sbjct 961642 AAGGTTCTGCC-GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 961584
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||| || ||| | |||||||| ||||| ||
Sbjct 961583 AATACCTTCCTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGAC 961524
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | |||||||| |||||||| || || || |||||||||||||||||
Sbjct 961523 TTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTT 961473
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| || || ||||||||||| ||||||||||| |
Sbjct 962158 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 962099
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | ||||| || ||||| ||||| | ||||| || || ||
Sbjct 962098 AGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 962039
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || |||||| ||| | |||||||| ||||| ||
Sbjct 962038 ATACCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACT 961979
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||| || || |||||||| ||||||||
Sbjct 961978 TCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | ||| || |||||||||||||| |||||||||||| |
Sbjct 962386 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 962327
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || ||||| || || | ||||| || || ||
Sbjct 962326 AAGGTTCTGCC-GTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGG 962268
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| ||||| ||| | |||||||| ||||| ||
Sbjct 962267 AATACCTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGAC 962208
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | |||||||| ||||| || || || |||||||| ||||||||
Sbjct 962207 TTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| || |||||||| ||||| ||||||||||| |
Sbjct 961930 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 961871
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || | || || || || |||||||| | ||||| || || ||
Sbjct 961870 AGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGA 961811
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| ||||| ||||| ||| | |||||||| ||||| ||
Sbjct 961810 ATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACT 961751
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 961750 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || || ||||||||||| ||||||||||| |
Sbjct 962614 CCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAG 962555
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || ||| || | || || || || || ||||| | ||||| || || ||
Sbjct 962554 AGAGTTCTG-CCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGG 962496
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| ||||| ||||| ||| | |||||||| ||||| ||
Sbjct 962495 AATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 962436
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 962435 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398349460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |