Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
seq6 89.7 4e-13
>seq1
Length=2570408
Score = 98.7 bits (108), Expect = 8e-16
Identities = 254/384 (66%), Gaps = 5/384 (1%)
Strand=Plus/Plus
Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707
|||| |||||| ||||| || || ||||| || |||| || || ||||| || | |
Sbjct 2441460 ACTCTCTTCATGAACAAGTCGGGGACCCACAATCCGTAGAAGAGGTCTCTTGCCCTCATT 2441519
Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAA-ATGTCCGCATGCCAGGG 131766
|| ||| | || | ||||| | | || | | | || ||||| ||||||| ||
Sbjct 2441520 TCCTCTTTGCCG-TGGTTTTTCCGGAGCTCAATCACTTCGAATATGTCGCCATGCCATGG 2441578
Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAAC 131823
||||||||||| || | || ||| ||||||| |||||||||| |||| | |
Sbjct 2441579 CTCCAAATACACAGCAAACGCACCTGGGCGCTTATTGCCGCCTTGATCGACATACCTGGC 2441638
Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883
||| ||| | || ||||||||||| |||| ||| | | | | || |||| |
Sbjct 2441639 TGTGTCATTGAACACCCGCAACATGGGTACCAATCCGCTTGAGGTACCGTTGGAAGTGGA 2441698
Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTT 131943
||| || || | ||||| || |||||||| | ||| || || || ||| |||
Sbjct 2441699 AATCAAGGACCCGGTTGCTCTAATGTTGTGAACATGGAGCCCTATGCCACCGGAAGCTTT 2441758
Query 131944 AGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAAT 132003
|| || || || |||| || || |||||||| || || | | ||| || | ||
Sbjct 2441759 TGAAATGAGGGCAGCTTTGTGAAGTGTTTTATAGATGCCATCAATGGAGTCTTCGTCCAT 2441818
Query 132004 GTCGACTAAAAAGCAAGAGGACAA 132027
| | || ||||| ||||||||
Sbjct 2441819 TGCCAACAAGAAGCACGAGGACAA 2441842
>seq6
Length=1120317
Score = 89.7 bits (98), Expect = 4e-13
Identities = 166/240 (69%), Gaps = 3/240 (1%)
Strand=Plus/Minus
Query 27011 ATAATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATAT 27069
||| |||||| || || | ||| | ||| ||||| || | ||||| || ||||| || |
Sbjct 962625 ATATTTATTGGCCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGT 962566
Query 27070 TGTAGTCGCTCAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGT 27128
||||||| | ||| || ||||||| | || ||||| ||| | || | | ||
Sbjct 962565 TGTAGTCAGAGAGAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGC 962507
Query 27129 TGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCT 27188
|| || || || | ||| || || || ||| || || | | | || | |||||
Sbjct 962506 TGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCG 962447
Query 27189 GTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || ||||||||||| ||| || | || || |||| ||| || |||||||||||||||
Sbjct 962446 GAGGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCATA 962387
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || | || || |||||||| || ||||||||
Sbjct 961930 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 961871
Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || ||||||| | || ||||| ||| |||| | | || || || || ||
Sbjct 961870 AGAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGG 961812
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || || || ||| || || | | | || | ||||| | | ||||||
Sbjct 961811 AATACCTTCCTTGTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAAC 961752
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| ||| || | || || |||| ||| || |||||||||||||||
Sbjct 961751 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCATA 961703
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || | ||||| || ||||| || ||||||||
Sbjct 962158 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 962099
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | ||||||| | ||||||||||| | || | | || || || || ||
Sbjct 962098 AGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 962039
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || || || ||||||| ||| | | | || | ||||| | | |||||||
Sbjct 962038 ATACCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACT 961979
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| ||| || | || || |||| || || || ||||||||||||
Sbjct 961978 TCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCATA 961931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934358568896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |