Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4 266 4e-66
seq1 100 4e-16
>seq4
Length=1381050
Score = 266 bits (294), Expect = 4e-66
Identities = 917/1412 (65%), Gaps = 31/1412 (2%)
Strand=Plus/Plus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
|||||| ||||||||| | ||||||||||| || ||||| || |||||||| |||||
Sbjct 120689 TCTTCTAGAGTAGATGTTGGAAGTGTATGGTTCGAAACATTCGTTGTTACCCAAAATTTG 120748
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCT---C 110814
| ||||| || ||||||||||| || | ||| | ||| | | ||| | || |
Sbjct 120749 GGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAACGAGTTTCTTAAACCGTGCTTGGC 120808
Query 110815 CTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG--TTGAGCTTGGTTTCACCTTCCCAC 110872
| | | ||| | | |||||||| | || || | | |||| ||||||
Sbjct 120809 CATATTCTGTTTCAAGGTG---TCCCAGTCCCACAATTCAGATGGCTTTCTG--TCCCAC 120863
Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932
| ||| || || | || || | ||| || |||||||| || || ||||| || | ||||
Sbjct 120864 AAGTCGAATTGCAACAAACCCTTGGAAGCTGGAGAACCTTCGAAAGTTTCGTAAGCACCT 120923
Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992
| ||||| ||||| || | | || | | |||| || |||||||| |||||
Sbjct 120924 TCAGCTTCGGCCAACTCGATGGAAGATTCAACAGCACCGTGGTAAATGGTTTCGAAGATT 120983
Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACA 111052
|| |||| ||||||||||| | || ||||||| | ||| || || |
Sbjct 120984 TGAATGTTCAATTCCTTGGCTTCTTGAGAGTCAAATGGTAAACGGAGAGCCATGAAGGCG 121043
Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111
|| || |||||||| ||||| | | |||| ||||| | || ||| ||||| | | | ||
Sbjct 121044 TCAGCAAGACCTTGCACACCGAGAGCAATTGGTCTATTTCTCATGTTAGAACGCTTG-GC 121102
Query 111112 AGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170
||| || || || | || | |||||||| || ||| | || || |||| ||
Sbjct 121103 T-TCTGGCACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTACGAGTGACAACCT 121161
Query 111171 TTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACAT 111224
| || | |||||| | |||||| | | ||| | | | | |||| | |||
Sbjct 121162 TAGTAACTTCATGTAACTTTTCAAAGTTGTACCAAGACGAGGTGGCATCTTTTTCAACAA 121221
Query 111225 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284
|| ||| | |||||| || ||||| || |||||||| || || | | || |
Sbjct 121222 ACGATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTTCTGGAGAAGAATATT 121281
Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344
| | |||||| || ||||||||| ||| || | ||||| ||||||||||| |||
Sbjct 121282 CAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTCT 121341
Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404
||||||| || ||||| ||||| | |||| | || || || || || || |||| || |
Sbjct 121342 TCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCCA 121401
Query 111405 GAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTC 111462
|| | | ||| || | | | || || | || ||| | | | | ||
Sbjct 121402 AGATGGAGTACCACAATTTTTGTGCCT--TAACAGTTTGTCTGCCTCTGTTTTCTCTTTC 121459
Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522
||| || ||| | ||| || || ||||| | || | | || || ||||
Sbjct 121460 GTATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTC 121519
Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582
|| ||| ||||||| | ||| | ||| || ||||| |||||||||||||| || ||
Sbjct 121520 GTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGG 121579
Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
|||||| |||| || || ||||||| | | | || ||||| | ||| || || ||
Sbjct 121580 AATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGA-TTTCTTCTTTACCGTGATTCTTTC 121638
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701
| || | ||| || | ||| |||| |||||| || || | || | |||| || |
Sbjct 121639 TGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCAC 121698
Query 111702 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757
| || | | ||| |||| | || || || || ||| ||| || || || | |
Sbjct 121699 CAGGTCTCTTG-TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACC 121757
Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817
|| || || ||||| | || ||| || || || ||| || | | |
Sbjct 121758 ATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGG 121817
Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877
| | |||||||||| |||||||| || || |||| ||||| ||||| |
Sbjct 121818 ATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTC 121877
Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937
| ||| | |||||||||| ||| ||||| || || |||||| |||||| ||| |||
Sbjct 121878 AAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGAC 121937
Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997
|| || || || ||||| || ||||| || || || | ||||| |||| | |
Sbjct 121938 ATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTT 121997
Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
|| ||||| || ||| ||||| | ||| || ||||| || |||||||| || |
Sbjct 121998 TGAGACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACA 122057
Query 112058 GCGACCCGCATGAACATGTACTGTGGGGTTTC 112089
||||| | ||||| || || ||| || ||||
Sbjct 122058 GCGACTCTCATGATCAAGTGCTGAGGTCTTTC 122089
Score = 114 bits (126), Expect = 2e-20
Identities = 123/160 (77%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 164662
|||||| | ||||| ||| |||| || | ||||| || || || || |||| | |||||
Sbjct 1293603 TATGGTAGAGTTGCTCCAAGATCGGGGTTGGCTGTCAAACACGGGATCTCAACT-GGTGC 1293661
Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722
|||||||||||| |||| || | ||| |||||||| || ||| | |||||||||| | |
Sbjct 1293662 TGGTGTTATTGATGCCGATTACAGAGGAGAAGTCAAGGTGGTTTTGTTCAATCACGCAAA 1293721
Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
|||||||| ||| | ||||| || ||| | || || |||
Sbjct 1293722 GAAAGACTTCGAGATCAAGAAGGGTGATAGAATTGCTCAA 1293761
>seq1
Length=2570408
Score = 100 bits (110), Expect = 4e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|||||||| || |||||||| ||||| || | | ||| || | ||| || ||||||
Sbjct 2441142 GATGCCAAGTTACAAACAGCGGTCTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACAT 2441201
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| || ||| || || || ||||| ||||| ||||| |||| ||||||| |||
Sbjct 2441202 AGATTCGAAGATTTGATTGTACCCAAGTTCTTCTGGTTCGACTTCCGATTGCACGAATCT 2441261
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
||||||||||| |||||| || ||||||||||| ||
Sbjct 2441262 TTGTAGAGCATATAGGGCAATCCGGTCTCCGTCTGAGA 2441299
Score = 82.4 bits (90), Expect = 1e-10
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 11617 TTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 11676
|||||| || | |||||||| ||||||| ||| |||||| | || ||| || || ||
Sbjct 606580 TTGCTTACCGATGGCATCAATTTCATCAACGAACACAATAGAAGGGGCATTCTCACGAGC 606639
Query 11677 GATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTT 11736
| | || | || ||||| | ||||| |||||||||||||| |||||||| |
Sbjct 606640 AGTCTTGAACAAGTCACGAACACGAGATGCACCGACACCAACAAACATTTCCACAAACTC 606699
Query 11737 TGCGGCAGAGCACTGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGA 11795
| |||| ||| | || ||| || ||| | |||||| ||| | |||| || | |
Sbjct 606700 AGACCCAGA-CACGGAATAGAAAGGAACACCAGCTTCACCAGCGGTCGCTCTTGCTATTA 606758
Query 11796 GGGTCTTTCCCGTACCTGG 11814
||||| || ||||||||
Sbjct 606759 AAGTCTTACCAGTACCTGG 606777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031937196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |