Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 266 4e-66 seq1 100 4e-16 >seq4 Length=1381050 Score = 266 bits (294), Expect = 4e-66 Identities = 917/1412 (65%), Gaps = 31/1412 (2%) Strand=Plus/Plus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| ||||||||| | ||||||||||| || ||||| || |||||||| ||||| Sbjct 120689 TCTTCTAGAGTAGATGTTGGAAGTGTATGGTTCGAAACATTCGTTGTTACCCAAAATTTG 120748 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCT---C 110814 | ||||| || ||||||||||| || | ||| | ||| | | ||| | || | Sbjct 120749 GGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAACGAGTTTCTTAAACCGTGCTTGGC 120808 Query 110815 CTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG--TTGAGCTTGGTTTCACCTTCCCAC 110872 | | | ||| | | |||||||| | || || | | |||| |||||| Sbjct 120809 CATATTCTGTTTCAAGGTG---TCCCAGTCCCACAATTCAGATGGCTTTCTG--TCCCAC 120863 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 | ||| || || | || || | ||| || |||||||| || || ||||| || | |||| Sbjct 120864 AAGTCGAATTGCAACAAACCCTTGGAAGCTGGAGAACCTTCGAAAGTTTCGTAAGCACCT 120923 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | ||||| ||||| || | | || | | |||| || |||||||| ||||| Sbjct 120924 TCAGCTTCGGCCAACTCGATGGAAGATTCAACAGCACCGTGGTAAATGGTTTCGAAGATT 120983 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACA 111052 || |||| ||||||||||| | || ||||||| | ||| || || | Sbjct 120984 TGAATGTTCAATTCCTTGGCTTCTTGAGAGTCAAATGGTAAACGGAGAGCCATGAAGGCG 121043 Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || || |||||||| ||||| | | |||| ||||| | || ||| ||||| | | | || Sbjct 121044 TCAGCAAGACCTTGCACACCGAGAGCAATTGGTCTATTTCTCATGTTAGAACGCTTG-GC 121102 Query 111112 AGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170 ||| || || || | || | |||||||| || ||| | || || |||| || Sbjct 121103 T-TCTGGCACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTACGAGTGACAACCT 121161 Query 111171 TTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACAT 111224 | || | |||||| | |||||| | | ||| | | | | |||| | ||| Sbjct 121162 TAGTAACTTCATGTAACTTTTCAAAGTTGTACCAAGACGAGGTGGCATCTTTTTCAACAA 121221 Query 111225 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284 || ||| | |||||| || ||||| || |||||||| || || | | || | Sbjct 121222 ACGATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTTCTGGAGAAGAATATT 121281 Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344 | | |||||| || ||||||||| ||| || | ||||| ||||||||||| ||| Sbjct 121282 CAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTCT 121341 Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404 ||||||| || ||||| ||||| | |||| | || || || || || || |||| || | Sbjct 121342 TCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCCA 121401 Query 111405 GAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTC 111462 || | | ||| || | | | || || | || ||| | | | | || Sbjct 121402 AGATGGAGTACCACAATTTTTGTGCCT--TAACAGTTTGTCTGCCTCTGTTTTCTCTTTC 121459 Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522 ||| || ||| | ||| || || ||||| | || | | || || |||| Sbjct 121460 GTATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTC 121519 Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 || ||| ||||||| | ||| | ||| || ||||| |||||||||||||| || || Sbjct 121520 GTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGG 121579 Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 |||||| |||| || || ||||||| | | | || ||||| | ||| || || || Sbjct 121580 AATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGA-TTTCTTCTTTACCGTGATTCTTTC 121638 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701 | || | ||| || | ||| |||| |||||| || || | || | |||| || | Sbjct 121639 TGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCAC 121698 Query 111702 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 | || | | ||| |||| | || || || || ||| ||| || || || | | Sbjct 121699 CAGGTCTCTTG-TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACC 121757 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || || || ||||| | || ||| || || || ||| || | | | Sbjct 121758 ATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGG 121817 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | |||||||||| |||||||| || || |||| ||||| ||||| | Sbjct 121818 ATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTC 121877 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | ||| | |||||||||| ||| ||||| || || |||||| |||||| ||| ||| Sbjct 121878 AAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGAC 121937 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || || ||||| || ||||| || || || | ||||| |||| | | Sbjct 121938 ATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTT 121997 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 || ||||| || ||| ||||| | ||| || ||||| || |||||||| || | Sbjct 121998 TGAGACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACA 122057 Query 112058 GCGACCCGCATGAACATGTACTGTGGGGTTTC 112089 ||||| | ||||| || || ||| || |||| Sbjct 122058 GCGACTCTCATGATCAAGTGCTGAGGTCTTTC 122089 Score = 114 bits (126), Expect = 2e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 164662 |||||| | ||||| ||| |||| || | ||||| || || || || |||| | ||||| Sbjct 1293603 TATGGTAGAGTTGCTCCAAGATCGGGGTTGGCTGTCAAACACGGGATCTCAACT-GGTGC 1293661 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 |||||||||||| |||| || | ||| |||||||| || ||| | |||||||||| | | Sbjct 1293662 TGGTGTTATTGATGCCGATTACAGAGGAGAAGTCAAGGTGGTTTTGTTCAATCACGCAAA 1293721 Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762 |||||||| ||| | ||||| || ||| | || || ||| Sbjct 1293722 GAAAGACTTCGAGATCAAGAAGGGTGATAGAATTGCTCAA 1293761 >seq1 Length=2570408 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 |||||||| || |||||||| ||||| || | | ||| || | ||| || |||||| Sbjct 2441142 GATGCCAAGTTACAAACAGCGGTCTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACAT 2441201 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | || ||| || || || ||||| ||||| ||||| |||| ||||||| ||| Sbjct 2441202 AGATTCGAAGATTTGATTGTACCCAAGTTCTTCTGGTTCGACTTCCGATTGCACGAATCT 2441261 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||||||||||| |||||| || ||||||||||| || Sbjct 2441262 TTGTAGAGCATATAGGGCAATCCGGTCTCCGTCTGAGA 2441299 Score = 82.4 bits (90), Expect = 1e-10 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 11617 TTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 11676 |||||| || | |||||||| ||||||| ||| |||||| | || ||| || || || Sbjct 606580 TTGCTTACCGATGGCATCAATTTCATCAACGAACACAATAGAAGGGGCATTCTCACGAGC 606639 Query 11677 GATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTT 11736 | | || | || ||||| | ||||| |||||||||||||| |||||||| | Sbjct 606640 AGTCTTGAACAAGTCACGAACACGAGATGCACCGACACCAACAAACATTTCCACAAACTC 606699 Query 11737 TGCGGCAGAGCACTGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGA 11795 | |||| ||| | || ||| || ||| | |||||| ||| | |||| || | | Sbjct 606700 AGACCCAGA-CACGGAATAGAAAGGAACACCAGCTTCACCAGCGGTCGCTCTTGCTATTA 606758 Query 11796 GGGTCTTTCCCGTACCTGG 11814 ||||| || |||||||| Sbjct 606759 AAGTCTTACCAGTACCTGG 606777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800