Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 226 3e-54 seq1 86.0 7e-12 >seq4 Length=1381050 Score = 226 bits (250), Expect = 3e-54 Identities = 1131/1773 (64%), Gaps = 65/1773 (4%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| || ||| || || ||||| | || || | ||||| || || || ||||| || Sbjct 122089 GAAAGACCTCAGCACTTGATCATGAGAGTCGCTGTTGGTATCCACGGTGACGACATCGAA 122030 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | ||||| ||| || ||||| ||| | |||| ||||| | || || Sbjct 122029 CGTGTTATTGAGACTTACAACCTCATGTCTCAAAGACACTTCACTCACGGGTCCCCTACT 121970 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 || ||||| || ||||| || || |||||||| ||| |||||| |||||| || Sbjct 121969 CTTTTCAACGCCGGTACTCCTGCTCCTCAAATGTCGTCTTGTTTCCTTGTCGCCATGAAA 121910 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || ||||| ||| |||||||||| | ||| | | ||||| ||||| |||| Sbjct 121909 GAAGACTCGATCGACGGTATCTACGACACTTTGAAAACTTGTGCTTTGATCTCCAAGTCT 121850 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 || || |||||||| |||||||||| | | | | | || ||| || Sbjct 121849 GCCGGTGGTATTGGTTTGCACATCCACAACATCCGTAGTACTGGTGCTTACATTGCTGGT 121790 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||| || || ||| | || || || ||| ||| || || Sbjct 121789 ACCAACGGTACCTCCAACGGTATCATCCCTATGGTCCGTGTGTTCAACAACACTGCCCGT 121730 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 || || | |||| ||| | | || || || |||| | || | || || || Sbjct 121729 TACGTTGACCAAGGTGGTAA-CAAGAGACCTGGTGCTTTCGCCTTGTACTTGGAACCTTG 121671 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| |||| ||| | || ||| | || | | || || ||| | || || | Sbjct 121670 GCACTCGGACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAAAT-CA 121612 Query 104692 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | || | ||||| ||| | || || |||||||| ||||| ||||||||| | ||||| Sbjct 121611 GAGCAAGAGATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTTGAAC 121552 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | | || | ||| | || || | ||| || |||| ||||| | | |||| | Sbjct 121551 AAAACGGTGAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATGTTTACG 121492 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGC-GACTGCGAC 104868 |||| || || ||| | ||| || ||||| |||| | ||| ||| || Sbjct 121491 GTGACGAATTCGAACAATTGTACGAAAGATACGAAAGAGAAAACAGAGGCAGACAA--AC 121434 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || || | ||||| | | || | | | |||||||| || ||||| || Sbjct 121433 TGTTAAGGCACAAAAATTGTGGTACTCCATCTTGGAAGCACAAACCGAAACCGGTACTCC 121374 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||| | |||||||| || |||||| | |||| || |||||||| |||||| | || Sbjct 121373 ATTCATGTTGTACAAAGATGCTTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATCAT 121314 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 |||| |||||| | || ||||| | |||| | | ||| || ||||| Sbjct 121313 CAAGTCTTCCAACTTGTGCTGTGAAATTGTTGAATATTCTTCTCCAGAAGAAGTTGCTGT 121254 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT-TTG 105107 |||||| | || || ||||| | || || ||| || ||| | | | | ||| Sbjct 121253 TTGTAACTTGGCTTCCATCGCCTTGCCATCGTTTGTTGAAAAAGATGCCACCTCGTCTTG 121194 Query 105108 AT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | | |||||| | || |||||||| || |||||| ||| | |||||| | Sbjct 121193 GTACAACTTTGAAAAGTTACATGAAGTTACTAAGGTTGTCACTCGTAACTTGAACAGAAT 121134 Query 105163 TATTGATAGAAATTTTTACCCCGTTG-AGACTGCT--CGTAAATCTAATATGAGACACCG 105219 ||||| | || | ||||| || ||| | ||| ||||| |||||| | | Sbjct 121133 CATTGACCGTAACTACTACCCAGTGCCAGAAGCCAAGCGT---TCTAACATGAGAAATAG 121077 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGC 105276 ||||||| ||||||||| || ||||| || || | ||||| ||| || | | Sbjct 121076 ACCAATTGCTCTCGGTGTGCAAGGTCTTGCTGACGCCTTCATGGCTCTCCGTTTAC---C 121020 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 |||||| || | ||||| |||||| | || | || || || ||||| || |||| Sbjct 121019 ATTTGACTCTCAAGAAGCCAAGGAATTGAACATTCAAATCTTCGAAACCATTTACCACGG 120960 Query 105337 CGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 ||| |||| | | || |||||||| || | ||| ||| | || ||||| || || Sbjct 120959 TGCTGTTGAATCT--TCCATCGAGTTGGCCGAAGCTGAAGGTGCTTACGAAACTTTCGAA 120902 Query 105395 GGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 |||||||||||||| |||||| || | ||||| || ||||||| || | | | || Sbjct 120901 GGTTCTCCAGCTTC-CAAGGGTTTGTTGCAATTCGACTTGTGGGA--CAGAAAGCCATCT 120845 Query 105454 TCA--CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGG---AGAAGGGTCTTCGTAAC 105508 | | |||||||| | | | ||| | | || || | ||| | | ||| Sbjct 120844 GAATTGTGGGACTGGGACAC---CTTGAAACAGAATATGGCCAAGCACGGTTTAAGAAAC 120788 Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 105568 | | | |||||||||||||| || ||||| | ||||| |||||||| || ||| Sbjct 120787 TCGTTGTTGGTTGCTCCAATGCCAACTGCTTCCACGTCCCAAATTTTGGGTAACAACGAA 120728 Query 105569 TGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGT 105627 || || ||||| ||||| | |||||||| ||| |||||| | || || || || Sbjct 120727 TGTTTCGAACCATACACTTCCAACATCTACTCT-AGAAGAGTGTTGGCTGGTGAATTCCA 120669 Query 105628 GATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 105685 |||||| || || | | | || |||| | || | ||||||||| | | | | Sbjct 120668 GATTGTTAATCCATACTTGT--TGCGTGACTTGGTTGATCTCGGTCTCTGGAACGATGCT 120611 Query 105686 ATGAAGGATCTCATGGT----GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCC 105741 |||||| | ||| | | | | ||||| || || | | |||| Sbjct 120610 ATGAAGAACAACATCATTTCCAACAAC----GGTTCTATCCAGGGCTTACCTAACGTTCC 120555 Query 105742 AAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGA 105801 | |||| ||| |||||| || || |||||||||| || || |||| || Sbjct 120554 CGACCAAATCAAGGCATTGTACAAGACGGTGTGGGAAATCAGTCAAAAACATATCATCGA 120495 Query 105802 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTCTTCAT 105858 ||||| || || | | ||||||||||||| ||| |||| || | ||| Sbjct 120494 TATGGCTGCCGACAGAGCAGCCTTCATTGATCAATCGCAATCATTGAACATTCACATCAA 120435 Query 105859 GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCT 105918 ||| || || ||| ||| | |||||||||| | ||| |||||||||| ||| | Sbjct 120434 GGA---CCCTACCATGGGTAAGTTGACTTCTATGCATTTCTACGGTTGGAAGAAAGGTTT 120378 Query 105919 CAAAACGGGGATGTATTACCTCCGATCTAAGGC 105951 || || || ||||| |||||| || | |||| Sbjct 120377 GAAGACCGGTATGTACTACCTCAGAACCCAGGC 120345 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 94723 GCCATCCA-AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGA 94781 |||||| | |||| | || || || | ||||| || || |||||| ||| ||| || Sbjct 294186 GCCATCGACAACA-TCCCATGCATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGATTAG 294244 Query 94782 T-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840 | || | | ||| || || | ||| || | | || ||||| || || ||||| | Sbjct 294245 TGACGACGACGCTTTG-TTCGGTGAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGTATTT 294303 Query 94841 TCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGT 94899 |||||||||||||||| ||| |||| | ||| | |||||| ||||| ||||| || Sbjct 294304 TCTTCTCTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCTGGC 294362 Query 94900 CTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||||||||| | |||| ||||||||| || | ||| || ||||| Sbjct 294363 TTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCACACCGACTTTGC 294418 >seq1 Length=2570408 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 9691 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 9750 |||||| || | ||||||||| ||||||| ||| || || | || ||| || ||||| Sbjct 606580 TTGCTTACCGATGGCATCAATTTCATCAACGAACACAATAGAAGGGGCATTCTCACGAGC 606639 Query 9751 -GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 | ||| || || || || ||||| || || |||||||||||||| |||||||| | Sbjct 606640 AGTCTTGAACAAG-TCACGAACACGAGATGCACCGACACCAACAAACATTTCCACAAACT 606698 Query 9810 TTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | | | ||| | || ||| || ||| || |||||| || | |||| || | Sbjct 606699 CAGACCCAG-ACACGGAATAGAAAGGAACACCAGCTTCACCAGCGGTCGCTCTTGCTATT 606757 Query 9869 AGAGTCTTACCCGTACCTGG 9888 | ||||||||| |||||||| Sbjct 606758 AAAGTCTTACCAGTACCTGG 606777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260741673920