Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 167 3e-36 seq1 95.1 1e-14 >seq4 Length=1381050 Score = 167 bits (184), Expect = 3e-36 Identities = 519/802 (65%), Gaps = 10/802 (1%) Strand=Plus/Plus Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164 ||||| |||||| || || ||||||||| | || | |||||| |||||| |||||| | Sbjct 121287 ATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTCTTCTTG 121346 Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACG 79224 ||||| || || ||||| ||||| | || || ||||| || || | | | | Sbjct 121347 TTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCCAAGATG 121406 Query 79225 CCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA-----CGT 79279 || ||| | | | ||| ||| |||| | | | |||| ||| Sbjct 121407 GAGTACCACAATTTTTGTGCCTTAACAGT----TTGT-CTGCCTCTGTTTTCTCTTTCGT 121461 Query 79280 ACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGT 79339 | | |||||| | | ||| | || || || ||||| | || ||| || ||||| Sbjct 121462 ATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTCGT 121521 Query 79340 GCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGA 79399 || | | ||| ||| || ||| | ||||| || |||||| || || || | Sbjct 121522 TAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGGAA 121581 Query 79400 TCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCA 79459 |||| ||||| | ||| || || | | || || || | || || ||| | | Sbjct 121582 TCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGATTTCTTCTTTACCGTGATTCTTTCTGA 121641 Query 79460 GCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCT 79519 |||| || || | |||||| | |||||| || |||| || | |||||| | ||| Sbjct 121642 TGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCACCAG 121701 Query 79520 TGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGG 79579 | |||| || || |||| ||||| ||||| ||||||||||| || |||| ||| | Sbjct 121702 GTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACCATAG 121761 Query 79580 GCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGT 79639 | | ||| |||| || | ||||| || || || | ||| | || |||| Sbjct 121762 GGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGGATGT 121821 Query 79640 TCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699 | | ||| | || || || |||| |||||||||| || || || | | Sbjct 121822 TGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTCAAAG 121881 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | |||||||| || ||||||||||| || ||||| ||||| ||||| || |||||| | Sbjct 121882 TGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGACATTT 121941 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGC 79819 | || |||||||||||||| || || || | | |||| |||||| |||| Sbjct 121942 GAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAG 122001 Query 79820 TCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGA 79879 ||| || | ||| ||||| | || || || |||||| |||||||| || || |||| Sbjct 122002 ACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACAGCGA 122061 Query 79880 CGCGCATGAAGAGGTACTGGGG 79901 | | ||||| | || ||| || Sbjct 122062 CTCTCATGATCAAGTGCTGAGG 122083 Score = 163 bits (180), Expect = 3e-35 Identities = 354/530 (67%), Gaps = 0/530 (0%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | ||||| ||||||| || || ||||| || |||||| || || || Sbjct 122083 CCTCAGCACTTGATCATGAGAGTCGCTGTTGGTATCCACGGTGACGACATCGAACGTGTT 122024 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| || | |||||| |||| | | || || |||||| Sbjct 122023 ATTGAGACTTACAACCTCATGTCTCAAAGACACTTCACTCACGGGTCCCCTACTCTTTTC 121964 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 ||||||||||| || || |||||| |||||||| || || ||||| || ||| Sbjct 121963 AACGCCGGTACTCCTGCTCCTCAAATGTCGTCTTGTTTCCTTGTCGCCATGAAAGAAGAC 121904 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 || || || |||||||| || | || || || |||||||||| |||| Sbjct 121903 TCGATCGACGGTATCTACGACACTTTGAAAACTTGTGCTTTGATCTCCAAGTCTGCCGGT 121844 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 ||||| || | ||| | || ||||| | |||| | || ||| || ||| Sbjct 121843 GGTATTGGTTTGCACATCCACAACATCCGTAGTACTGGTGCTTACATTGCTGGTACCAAC 121784 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 || || |||||||| |||| ||| |||| || ||||||||||| ||| | ||||| Sbjct 121783 GGTACCTCCAACGGTATCATCCCTATGGTCCGTGTGTTCAACAACACTGCCCGTTACGTT 121724 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 |||| || || ||| | || | |||||| | ||| | || || |||||| || Sbjct 121723 GACCAAGGTGGTAACAAGAGACCTGGTGCTTTCGCCTTGTACTTGGAACCTTGGCACTCG 121664 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 ||| || | |||||| |||| | | ||| || ||| | || || || | | Sbjct 121663 GACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAAATCAGAGCAAGA 121604 Query 19583 GACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 || || ||| | ||| | |||||||| || || |||||| || ||||| Sbjct 121603 GATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTTGA 121554 >seq1 Length=2570408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 399/617 (65%), Gaps = 16/617 (3%) Strand=Plus/Minus Query 19097 GAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCG 19156 ||||||||||| || |||||| | |||||||| | || ||||||||| ||||| | | Sbjct 2441992 GAGACGCCTCAATATCTTTTCCTCCGAGTCGCCTTGGGTATCCATGGCAACGACTTGGCC 2441933 Query 19157 CGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACC 19216 | || ||| || ||||| || ||| || || | ||||| || || | || || Sbjct 2441932 AGTGTAATCGAAACGTACGAGCTCATGTCGCAAAAATACTTCATTCATGCATCTCCAACT 2441873 Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 |||||||| || ||||| ||||| | |||| || ||| | |||| ||| | Sbjct 2441872 CTTTTCAATGCAGGTACCAACAATAACTATTTGTCCTCGTGCTTCTTGTTGGCAATGGAC 2441813 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || ||| |||||| |||||||| | || || | | || | ||| || || Sbjct 2441812 GAAGACTCCATTGATGGCATCTATAAAACACTTCACAAAGCTGCCCTCATTTCAAAAGCT 2441753 Query 19337 TCCGGGGGTATCGGGATCCACTGCTC-GAATATCCGGTCGA-GTGGTACACGAAT--CAA 19392 ||||| || || ||| |||| || || || || | | | ||| | || | || Sbjct 2441752 TCCGGTGGCATAGGGCTCCA-TGTTCACAACATTAGAGCAACCGGGTCCTTGATTTCCAC 2441694 Query 19393 TGGGACGAACGGAGTAGCCGA--CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACG 19450 | | |||| ||| | | ||| | || || ||| | || || ||||| |||| Sbjct 2441693 T---TCCAACG--GTACCTCAAGCGGATTGGTACCCATGTTGCGGGTGTTCAATGACACA 2441639 Query 19451 GCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAG 19510 |||||||| ||| | || || ||| || ||| || |||| || | || | ||| Sbjct 2441638 GCCAGGTATGTCGATCAAGGCGGCAATAAGCGCCCAGGTGCGTTTGCTGTGTATTTGGAG 2441579 Query 19511 CCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAG 19570 |||||||| | ||| | | || | | || || || ||||| || | ||||| Sbjct 2441578 CCATGGCATGGCGACATATTCGAAGTGATTGAGCTCCGGAAAAACCACGGCAAAGAGGAA 2441519 Query 19571 ATGCGCTGTCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGT 19629 ||| | | ||||||||| |||| |||||| | || ||| | |||||| ||| || Sbjct 2441518 ATGAGGGCAAGAGACCTCTTCTACGG-ATTGTGGGTCCCCGACTTGTTCATGAAGAGAGT 2441460 Query 19630 TGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGC-CCTGGCCTACCCGACG 19688 |||| | ||| ||||| || | | || ||| |||| || ||| | | |||| Sbjct 2441459 CAAGAACAATGAAAAATGGTCACTCTTTTCGCCTGACG-ATGCGCCCGGCTTGTCTGACG 2441401 Query 19689 TCTACGGCGAGGCGTTC 19705 | || ||||| | |||| Sbjct 2441400 TGTATGGCGAAGAGTTC 2441384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524745147520