Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 185 1e-41 seq1 105 7e-18 >seq4 Length=1381050 Score = 185 bits (204), Expect = 1e-41 Identities = 402/602 (67%), Gaps = 0/602 (0%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||| | ||||| | |||||||||||||||||| | ||||| Sbjct 122083 CCTCAGCACTTGATCATGAGAGTCGCTGTTGGTATCCACGGTGACGACATCGAACGTGTT 122024 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| || | ||| |||| |||| || |||| | || || || ||| Sbjct 122023 ATTGAGACTTACAACCTCATGTCTCAAAGACACTTCACTCACGGGTCCCCTACTCTTTTC 121964 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 ||||| ||||| | ||||| |||||| || ||||| || || ||||| || ||| Sbjct 121963 AACGCCGGTACTCCTGCTCCTCAAATGTCGTCTTGTTTCCTTGTCGCCATGAAAGAAGAC 121904 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 ||||||||||| |||||||| || | || ||||| |||||||||| | ||| Sbjct 121903 TCGATCGACGGTATCTACGACACTTTGAAAACTTGTGCTTTGATCTCCAAGTCTGCCGGT 121844 Query 53420 GGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||||| ||| | ||| | ||| ||||| | || | || || || ||| Sbjct 121843 GGTATTGGTTTGCACATCCACAACATCCGTAGTACTGGTGCTTACATTGCTGGTACCAAC 121784 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 || | || | || ||| | |||||| |||| || ||||||||||| ||||| ||||| Sbjct 121783 GGTACCTCCAACGGTATCATCCCTATGGTCCGTGTGTTCAACAACACTGCCCGTTACGTT 121724 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 |||| |||||| ||| | || | |||||| | ||| | || || |||||| | Sbjct 121723 GACCAAGGTGGTAACAAGAGACCTGGTGCTTTCGCCTTGTACTTGGAACCTTGGCACTCG 121664 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 ||||| | || || |||| | | |||||| ||| | ||||| || | | Sbjct 121663 GACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAAATCAGAGCAAGA 121604 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 || || || |||| || |||||||| || || |||||| | || || | ||| Sbjct 121603 GATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTTGAACAAAACGGT 121544 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779 |||||| ||| | | || |||||| || ||| | | ||| |||||||| || Sbjct 121543 GAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATGTTTACGGTGACGAA 121484 Query 53780 TT 53781 || Sbjct 121483 TT 121482 >seq1 Length=2570408 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233 ||||||||||| ||||||||| | || ||||||||||||||||| || |||||| | Sbjct 2441992 GAGACGCCTCAATATCTTTTCCTCCGAGTCGCCTTGGGTATCCATGGCAACGACTTGGCC 2441933 Query 53234 CGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACC 53293 |||| || |||||||| | ||| ||||| ||||| | || || | ||||| Sbjct 2441932 AGTGTAATCGAAACGTACGAGCTCATGTCGCAAAAATACTTCATTCATGCATCTCCAACT 2441873 Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || ||||| || ||||| || | | |||| |||||| || |||| ||| | Sbjct 2441872 CTTTTCAATGCAGGTACCAACAATAACTATTTGTCCTCGTGCTTCTTGTTGGCAATGGAC 2441813 Query 53354 GATGACTCGATCGACGGCATCTA 53376 || ||||| || || |||||||| Sbjct 2441812 GAAGACTCCATTGATGGCATCTA 2441790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400