Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 3e-28
seq1 131 1e-25
>seq6
Length=1120317
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || ||||||| ||| | || ||| | ||||| ||| | |||
Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || |||||||| ||||| || ||||| || ||
Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| ||||||||||||||| || || |||| || ||||||
Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 962111
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || ||||| ||| | ||| | ||||| ||
Sbjct 962112 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTAT 962161
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| ||||||| ||| | || ||| | ||||| ||| | |||
Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||||| |||||||| ||||| || ||||| || ||
Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || |||||||||||| | || |||| || ||||||
Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || ||| | || ||||| ||| | ||| | ||||| ||
Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTAT 961933
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| || ||| | ||||| | ||||| ||| | |||
Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| |||||||||||||| ||||| || ||||| || ||
Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||| | ||||| || |||||||||||| | ||| | ||||| ||||||
Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 962339
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || ||||| ||| | ||| | ||||| ||
Sbjct 962340 ATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGGTAT 962389
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| ||||||| ||| | || ||| | ||||| ||| | |||
Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||||| |||||||| ||||| || ||||| || ||
Sbjct 962448 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 962507
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || |||||||||||| | || | || || ||||||
Sbjct 962508 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAAC 962567
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| |||||||| || ||| | || ||||| ||| | ||| | ||||||
Sbjct 962568 ATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGGC 962615
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || ||||||| ||| | ||||| | ||||| ||| | |||
Sbjct 961476 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 961535
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || |||||||| ||||| || ||||| || ||
Sbjct 961536 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961595
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || |||||||||||| | ||| | ||||| ||||||
Sbjct 961596 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 961655
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || ||||| ||| | ||| | ||||| ||
Sbjct 961656 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTAT 961705
>seq1
Length=2570408
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| | ||||| ||| | ||||| | ||||| || | |||
Sbjct 1137440 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCCTCC 1137381
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||||||||| || ||||| || ||
Sbjct 1137380 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAG 1137321
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || ||||||||||| || ||| | || || ||||||
Sbjct 1137320 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAAC 1137261
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| ||| | || ||||| ||| | ||| | |||||
Sbjct 1137260 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918356508160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |