Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq6 102 6e-17
seq1 93.3 3e-14
>seq6
Length=1120317
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || || | ||||| || ||||| | || |||||| ||
Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || |||| ||||| ||||| ||||| |||||| |||| || |
Sbjct 962220 GACACCATCGACAAC--GTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACC 962277
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||| | ||||| |||||||| || |||||||| |||| | | ||||||||| ||||
Sbjct 962278 AGCAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACA 962337
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || |||| | || ||||| ||| | ||| | || ||
Sbjct 962338 ACATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 962386
Score = 95.1 bits (104), Expect = 9e-15
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845
||||||||||||||| || || || | || || || ||||| | || ||||||
Sbjct 961472 TAAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAATC 961531
Query 27846 CACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903
||||| || |||| || ||| || || ||||| |||||| ||||
Sbjct 961532 TTCCGACACCATCGACAAC--GTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCA 961589
Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963
|| |||||| | || || |||||||| || |||||||| |||| | | |||||||||
Sbjct 961590 GACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGAC 961649
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||| || ||| | || ||||| ||| | ||| | || ||
Sbjct 961650 TACAACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 961702
>seq1
Length=2570408
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || ||||| | || ||||| |
Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||||| || ||||| ||||| || || |||||||||||| | || |
Sbjct 1137383 TCCGACACCATCGACAAT--GTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAG 1137326
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| |||||| | || || |||||||| || |||||||| || | | | |||||| || |
Sbjct 1137325 ACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACT 1137266
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| ||| | || ||||| ||| | ||| | || ||
Sbjct 1137265 ACAACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862365303416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |