Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6 156 1e-32
seq1 125 2e-23
>seq6
Length=1120317
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| ||||| |||||||||||||| || || | ||| || || ||
Sbjct 961919 TCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCC 961860
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || ||||| || | | ||| ||||| || |||| ||||||||
Sbjct 961859 GTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 961800
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || || ||||| ||||||||||| || |||||| || | ||||||
Sbjct 961799 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961740
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| ||||| | |||||
Sbjct 961739 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| || || || || ||||||||||| || || | || || || ||
Sbjct 962603 TCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCC 962544
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || |||||||| | | ||| ||||| || |||| ||||||||
Sbjct 962543 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 962484
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || || ||||| ||||||||||| ||| |||||| || | ||||||
Sbjct 962483 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGAT 962424
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| ||||| | |||||
Sbjct 962423 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
Score = 140 bits (154), Expect = 8e-28
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| || || ||||||||||| || || | | ||| || ||
Sbjct 961691 TCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 961632
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | ||| ||||| || |||| ||||||||
Sbjct 961631 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 961572
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| ||||| ||||||||||| || ||| || || | || ||
Sbjct 961571 GTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 961512
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || | ||||| || || | |||||||||
Sbjct 961511 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTTA 961472
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| || || ||||||||||| || || | ||| || || ||
Sbjct 962147 TCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 962088
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| || || || || ||||| | | ||| ||||| || || | ||||||||
Sbjct 962087 GTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTT 962028
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| ||||| || |||||||| || |||||| || | ||||||
Sbjct 962027 GTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961968
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | ||||| || || | |||||
Sbjct 961967 GGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| |||||||| || ||||||||||| || || | | ||| || ||
Sbjct 962375 TCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 962316
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | ||| ||||| || |||| ||||||||
Sbjct 962315 GTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 962256
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || || || || ||||| ||||||||||| || ||| || || | || ||
Sbjct 962255 GTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 962196
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | ||||| || || | |||||
Sbjct 962195 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
>seq1
Length=2570408
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| |||||||| ||||||||||| || || | | ||| || |||||||||| ||
Sbjct 1137237 GTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTG 1137296
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||| ||||| || || | ||||| ||||| ||||||||
Sbjct 1137297 CTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTT 1137356
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || ||||||||||| ||| || || || | || || ||||| || ||
Sbjct 1137357 GGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCGGT 1137416
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| |||||| || || | ||||| ||
Sbjct 1137417 TAAAGTCTTGACGAAAATTTGCATCTT 1137443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151881186920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |