Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq6 174 4e-38
seq1 152 1e-31
seq3 86.0 1e-11
>seq6
Length=1120317
Score = 174 bits (192), Expect = 4e-38
Identities = 168/216 (78%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | |||||| || ||||| ||||||| ||||| || | | |||||| ||
Sbjct 962603 TCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCC 962544
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||||||||| | || ||| ||||| || ||||||||||||||
Sbjct 962543 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 962484
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || ||| || ||||||||||| |||| ||| || ||||| |||||
Sbjct 962483 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGAT 962424
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | || | ||||||
Sbjct 962423 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
Score = 168 bits (186), Expect = 2e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || |||||||||||||||| ||||| || | | |||||| ||
Sbjct 961919 TCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCC 961860
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| |||||||| || | || ||| ||||| || ||||||||||||||
Sbjct 961859 GTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 961800
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || ||| || ||||||||||| || | ||| || ||||| |||||
Sbjct 961799 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961740
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | || | ||||||
Sbjct 961739 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 167 bits (184), Expect = 6e-36
Identities = 169/220 (77%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||| ||||| ||
Sbjct 961691 TCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 961632
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| || || ||||| | || ||| ||||| || ||||||||||||||
Sbjct 961631 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 961572
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || || ||||||||||| || | ||| || || || || ||
Sbjct 961571 GTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 961512
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717
||||| || ||||| || || | ||| | ||||||||||
Sbjct 961511 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTTA 961472
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||||||||||||||| ||||||| ||||| |||| ||| ||||| ||
Sbjct 962375 TCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 962316
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| || || ||||| | || ||| ||||| || ||||||||||||||
Sbjct 962315 GTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 962256
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| || || ||| || ||||||||||| || | ||| || || || || ||
Sbjct 962255 GTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 962196
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || || | ||| | ||||||
Sbjct 962195 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| || | | |||||| ||
Sbjct 962147 TCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 962088
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | || || || || ||||| | || ||| ||||| || || |||||||||||
Sbjct 962087 GTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTT 962028
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || || || |||||||| || | ||| || ||||| |||||
Sbjct 962027 GTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961968
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || || | ||| | ||||||
Sbjct 961967 GGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
>seq1
Length=2570408
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| || ||||| || ||||||| ||||| || | ||| ||||| ||
Sbjct 1137225 TCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 1137284
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| || || ||||| | || ||| ||||| || || |||||||| ||
Sbjct 1137285 ATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTT 1137344
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| ||||||||||| |||| || || || || || ||
Sbjct 1137345 GTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 1137404
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 1137405 GGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 1137443
>seq3
Length=1810771
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| |||||||| || || || || |||||||||||||| ||||||||
Sbjct 1502159 GAAAATTTGACCATCGGTAATAGAAATGACGTTAGTTGGGATATAAGCAGAGACATCACC 1502100
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | || || || || || | || ||| ||||
Sbjct 1502099 ACCTTGGGTTTCAATGACTGGCAAAGCAGTCAAAGAACCAGCACC 1502055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531077765552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |