Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4 215 4e-51 >seq4 Length=1381050 Score = 215 bits (238), Expect = 4e-51 Identities = 559/844 (66%), Gaps = 16/844 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || |||| |||||||||||| || || || || | || || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCAC-ACTTTAGAGCTACAAG 4375 ||||| || || || || || || ||||||| ||||| || || || || | Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTACCCAAG-GCAACCAA 294594 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 ||||| ||| || || || || | || |||| ||| | || ||| || || | || Sbjct 294593 CAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACAA 294534 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || || | || | || || || |||| ||| || | || ||||| || || || Sbjct 294533 GCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGAT 294474 Query 4496 ATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 ||||| || || | | ||| | ||| |||| ||||| || || ||| Sbjct 294473 --CTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAGGCA 294416 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || |||||||||||||| | | |||| ||||| || || || || || ||| Sbjct 294415 AAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGGC 294356 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || ||||||||| || | ||| || |||| ||||| || ||||| ||||| || ||| Sbjct 294355 ATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACCT 294296 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 || ||||||||||| || || |||| |||||| | | | | ||| |||||||| Sbjct 294295 TCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATCCAT 294236 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA- 4792 | || ||||||| || || ||||| | ||| || || ||| || ||||| || || Sbjct 294235 CTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAACAAG 294176 Query 4793 ---TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 | ||| || ||| || | || || ||||| || | || || |||| Sbjct 294175 AAGTCAGCTTCCTT----TGGATCCTTGATGTAGGTGTCAATCAATAACGAGTAAGTTTC 294120 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 || || || ||||| || || || || ||||| || ||| | ||||| || || || Sbjct 294119 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTG 294060 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 ||||| | || |||| || ||||||||||| || ||||| ||| ||| ||||| Sbjct 294059 CACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAA 294000 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAAGTTTTTTCCAGTGGG 5028 || ||||| | ||| || ||| | |||| | | | ||| | ||||||| Sbjct 293999 GAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAG-CTGTTCCAGTCTT 293941 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088 | |||||| | || || | ||||| | ||||| || || ||||| ||||| |||| Sbjct 293940 GGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTGT 293881 Query 5089 ACAT 5092 |||| Sbjct 293880 ACAT 293877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049558362664