Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq4 215 4e-51
>seq4
Length=1381050
Score = 215 bits (238), Expect = 4e-51
Identities = 559/844 (66%), Gaps = 16/844 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || |||| |||||||||||| || || || || | || || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCAC-ACTTTAGAGCTACAAG 4375
||||| || || || || || || ||||||| ||||| || || || || |
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTACCCAAG-GCAACCAA 294594
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
||||| ||| || || || || | || |||| ||| | || ||| || || | ||
Sbjct 294593 CAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACAA 294534
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
|| || | || | || || || |||| ||| || | || ||||| || || ||
Sbjct 294533 GCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGAT 294474
Query 4496 ATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553
||||| || || | | ||| | ||| |||| ||||| || || |||
Sbjct 294473 --CTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAGGCA 294416
Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
|| || |||||||||||||| | | |||| ||||| || || || || || |||
Sbjct 294415 AAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGGC 294356
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| ||||||||| || | ||| || |||| ||||| || ||||| ||||| || |||
Sbjct 294355 ATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACCT 294296
Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733
|| ||||||||||| || || |||| |||||| | | | | ||| ||||||||
Sbjct 294295 TCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATCCAT 294236
Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA- 4792
| || ||||||| || || ||||| | ||| || || ||| || ||||| || ||
Sbjct 294235 CTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAACAAG 294176
Query 4793 ---TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849
| ||| || ||| || | || || ||||| || | || || ||||
Sbjct 294175 AAGTCAGCTTCCTT----TGGATCCTTGATGTAGGTGTCAATCAATAACGAGTAAGTTTC 294120
Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909
|| || || ||||| || || || || ||||| || ||| | ||||| || || ||
Sbjct 294119 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTG 294060
Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969
||||| | || |||| || ||||||||||| || ||||| ||| ||| |||||
Sbjct 294059 CACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAA 294000
Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAAGTTTTTTCCAGTGGG 5028
|| ||||| | ||| || ||| | |||| | | | ||| | |||||||
Sbjct 293999 GAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAG-CTGTTCCAGTCTT 293941
Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088
| |||||| | || || | ||||| | ||||| || || ||||| ||||| ||||
Sbjct 293940 GGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTGT 293881
Query 5089 ACAT 5092
||||
Sbjct 293880 ACAT 293877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049558362664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |