Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 120 7e-22 seq1 111 4e-19 >seq6 Length=1120317 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | | |||||| || ||||| | Sbjct 962138 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCA 962080 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| ||||| ||||| | || |||||||| | | ||| |||||||| ||||| | Sbjct 962079 ATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGA 962020 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 962019 TCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTAC 961960 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||||| ||||| Sbjct 961959 CGGTCAAGGTCTTAACGAAGATTTGCAT 961932 Score = 113 bits (124), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| |||| || ||||| || ||||| | Sbjct 961682 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCA 961624 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||| ||||| | || |||||||| | | || |||||||| ||||| | Sbjct 961623 ATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGA 961564 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| || | || | | |||| ||| || ||||| | ||||| || || | Sbjct 961563 TCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 961504 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 | || | ||||| ||||| | ||||||||| Sbjct 961503 CGGTCAAGGTCTTGACGAAAATTTGCATTTTA 961472 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || |||||||||||||| |||| || ||||| || ||||| | Sbjct 962366 CAAG-TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCA 962308 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||| ||||| | || |||||||| | | || |||||||| ||||||| Sbjct 962307 ATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAA 962248 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||| | || | | |||| ||| || ||||| | ||||| || || | Sbjct 962247 TTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 962188 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||||| ||||| Sbjct 962187 CAGTCAAGGTCTTAACGAAGATTTGCAT 962160 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || ||||||||||||||||| || | | |||||| || ||||| | Sbjct 961910 CAAG-TGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCTTCCA 961852 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || ||||| || | || |||||||| | | || |||||||| ||||| | Sbjct 961851 ATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGA 961792 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 961791 TTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTAC 961732 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| ||||| Sbjct 961731 CGGTCAAAGTCTTGACAAAGATTTGCAT 961704 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || ||||| || |||||||||||||| || | | |||||| || ||||| | Sbjct 962594 CAAG-TGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCCGTCTTCCA 962536 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || |||||||| | | || |||||||| ||||| | Sbjct 962535 ATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGA 962476 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||| | || | | |||| || || ||||| | ||| || || || | Sbjct 962475 TTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGATGGTCTTAC 962416 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| ||||| Sbjct 962415 CGGTCAAAGTCTTGACAAAGATTTGCAT 962388 >seq1 Length=2570408 Score = 111 bits (122), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| |||||||||||||| || | || ||||| |||||||| | Sbjct 1137234 CAAG-TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCA 1137292 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||| ||||| | || |||||||| | | ||| ||||| || ||||| | Sbjct 1137293 ATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGA 1137352 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| ||||| | ||||| || || | Sbjct 1137353 TCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTAC 1137412 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 1137413 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 1137443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820681733368