Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq6 179 8e-40
seq1 147 5e-30
seq2 102 2e-16
>seq6
Length=1120317
Score = 179 bits (198), Expect = 8e-40
Identities = 155/192 (81%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | || || || | |||||| ||||||||
Sbjct 962123 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAA 962064
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||| ||||| || ||||| ||||||||||||||||| | ||| ||| |
Sbjct 962063 GATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGATTTGACGTT 962004
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||| ||||| | |||||| |||||||| ||||| ||||||||
Sbjct 962003 GTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAAC 961944
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 961943 GAAGATTTGCAT 961932
Score = 176 bits (194), Expect = 9e-39
Identities = 160/199 (80%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||| | |||| || | ||| || || | ||| || |||||||
Sbjct 961667 TTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCTTCCAATTGCTTACCGGCAA 961609
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||| ||||| |||||||| ||||||||||||||||| | ||| |||
Sbjct 961608 AGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTAACGT 961549
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| ||||| ||||| |||| ||||||||| | || || |||||||| ||||| ||||| |
Sbjct 961548 TGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGA 961489
Query 283087 CGAATATCTGCATTTTCAT 283105
|||| || |||||||| ||
Sbjct 961488 CGAAAATTTGCATTTTAAT 961470
Score = 167 bits (184), Expect = 5e-36
Identities = 152/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||||||||||||||||| ||| || | ||| || || | ||| || || || ||
Sbjct 961895 TTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAA 961836
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||| ||||| |||||||| |||||||||||||| || | || ||| |
Sbjct 961835 AATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACGTT 961776
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| |||| ||| ||||| | |||||| |||||||| ||||||||||| ||
Sbjct 961775 GTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGAC 961716
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 961715 AAAGATTTGCAT 961704
Score = 158 bits (174), Expect = 3e-33
Identities = 150/192 (78%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| || || | ||| || || | ||| || || || ||
Sbjct 962579 TTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAA 962520
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||| ||||| |||||||| |||||||||||||| || | || ||| |
Sbjct 962519 GATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACGTT 962460
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| || | ||| ||||| | |||||| |||||||| ||||||||||| ||
Sbjct 962459 GTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGAC 962400
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 962399 AAAGATTTGCAT 962388
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||| | |||| || | ||| || || | ||| || |||||||
Sbjct 962351 TTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCTTCCAATTGCTTACCGGCAA 962293
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
|||| || | ||| ||||| |||||||| ||||||||||| || || | || |||
Sbjct 962292 AGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATTTTAGACTTGACGT 962233
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| ||||| ||||| |||| ||||||||| | || || |||||||| ||||| |||||||
Sbjct 962232 TGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAA 962173
Query 283087 CGAATATCTGCAT 283099
|||| || |||||
Sbjct 962172 CGAAGATTTGCAT 962160
>seq1
Length=2570408
Score = 147 bits (162), Expect = 5e-30
Identities = 151/195 (77%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
|| ||||||||||||||||||| |||| || | ||||| || | ||| || ||||||||
Sbjct 1137250 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCCAATTGCTTACCGGCAAA 1137308
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||| ||||| || ||||| || |||||||||||||| | || || |
Sbjct 1137309 GATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGACTTGACATT 1137368
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| || | |||||||| | || || |||||||| || |||||||| ||
Sbjct 1137369 GTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGAC 1137428
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 1137429 GAAAATTTGCATCTT 1137443
>seq2
Length=2224902
Score = 102 bits (112), Expect = 2e-16
Identities = 160/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Minus
Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTC 317039
||||| | |||||| || || || | || || | | | ||| | || ||||| |||||
Sbjct 2124327 CCGTCAATGTCATGTTCGACGTAAACGGTCTT-ACATTCATCTTGGGTTGGGAAACCTTC 2124269
Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099
| |||||||| |||| || ||||||| || ||||| |||||||| || || || ||
Sbjct 2124268 AACTTGACCGTTAGCAATAGCTCTCATCAAGGTAGACTTACCAGCACCGTTAGGACCACA 2124209
Query 317100 AAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTT 317156
| ||| || | |||| |||||| | || |||| ||||||| | |||||
Sbjct 2124208 CAAACCGTATCTTCTGTTTC---TCTTCAATCTGAATTGGGTCTTGTTCAACAAGATCTT 2124152
Query 317157 ACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| |||| || |||| |||||||||||| | ||||| ||| || ||
Sbjct 2124151 AGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 2124107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739092709232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |