Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 3e-27
seq1 138 3e-27
>seq6
Length=1120317
Score = 138 bits (152), Expect = 3e-27
Identities = 171/231 (74%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
||||||||| |||||||||| || || | || || || || || ||| | || || |
Sbjct 961471 TTAAAATGC---AAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCG 961527
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| || ||||||||||| ||||| ||| ||||| || ||||| ||||| || || |
Sbjct 961528 AATCTTCCGACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCAC 961587
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CC 178091
| ||||||||| || | ||||| ||||| || || | ||||| || || || |||| ||
Sbjct 961588 CAGACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAAC-CTTGTCC 961646
Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||| ||||||| ||||| || || || | || |||||| | |||
Sbjct 961647 GACTACAACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGA 961697
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | || || || || ||||| | || || ||| || |||
Sbjct 961707 CAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCCGAC 961766
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| || || || ||||| ||||| || || || |||||||||
Sbjct 961767 ACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAGCAA 961826
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || || | ||||| || || |||||| | || || ||| ||
Sbjct 961827 AGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAACATC 961886
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| || || || | || |||||| | |||
Sbjct 961887 CAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGA 961925
Score = 129 bits (142), Expect = 1e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || || || ||| | || || ||| || |||
Sbjct 962163 CAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGAC 962222
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| || ||||| ||||| ||||| || || || |||||||||
Sbjct 962223 ACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAGCAA 962282
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| ||||| || || | ||||| || || || |||| |||| || ||| |
Sbjct 962283 AGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAAC-CTTGTCCGACTACAACAT 962341
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || || || | || |||||| | |||
Sbjct 962342 CCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGA 962381
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | || || || || ||||| | || || ||| ||| |||
Sbjct 962391 CAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCCGAC 962450
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| || || || ||||| ||||| || || || |||||||||
Sbjct 962451 ACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAGCAA 962510
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | ||||| || || ||||| | || || ||| ||
Sbjct 962511 AGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAACATC 962570
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 962571 CAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGA 962609
>seq1
Length=2570408
Score = 138 bits (152), Expect = 3e-27
Identities = 164/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||| | || || || ||| |||
Sbjct 1137437 CAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCCTCCGAC 1137378
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| || ||||||||||| ||||| || |||||||||
Sbjct 1137377 ACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAGCAA 1137318
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| ||||| || || | |||||||| || || |||| | || || ||| |
Sbjct 1137317 AGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 1137259
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| || || || || || | || |||||| | |||
Sbjct 1137258 CCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGA 1137219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731076617552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |