Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10 165 1e-35 seq7 161 1e-34 seq11 111 2e-19 >seq10 Length=1371409 Score = 165 bits (182), Expect = 1e-35 Identities = 182/242 (75%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| ||| | || || |||| || ||||| || || | || | ||| | Sbjct 919916 ACAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACGATTACCCTGGAAGTCGAATCT 919975 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || ||| ||| | || || ||||||||||| |||||||| ||||||||| Sbjct 919976 TCAGACACTATTGATAACGTCAAGTCTAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 920035 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||||| || || |||||||| || ||| | |||||| || ||||| | ||||| Sbjct 920036 CAACAAAGACTAATCTTTGCAGGGAAGCAACTTGAGGATGGTAGAACACTGTCCGATTAC 920095 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT---TAAA 124772 ||||||||||| ||||| ||||| ||||||||| || | ||| |||||||||| |||| Sbjct 920096 AATATTCAAAAGGAATCTACTTTACATTTGGTTCTAAGATTAAGAGGTGGTATGTGTAAA 920155 Query 124773 AA 124774 || Sbjct 920156 AA 920157 >seq7 Length=452560 Score = 161 bits (178), Expect = 1e-34 Identities = 442/666 (66%), Gaps = 21/666 (3%) Strand=Plus/Plus Query 205311 TACTTGTCtttttatttttaattttGG-AAATGGGTTTGGTGTACGTTCTAATTGttttt 205369 ||||| |||||| || || |||||||| |||| || || | || || ||||| | Sbjct 132254 TACTTTTCTTTTAATGTTCAATTTTGGGAAATCTCTTGGGACT-CGAGATATTTGTTCCT 132312 Query 205370 ttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCAT 205429 |||| ||| | ||||| ||| | |||||| | ||| | | |||||||||||||| Sbjct 132313 TTAAAGCATCGACATGATCCTTATAAACATGTGCGTCACCTAAAGTATGAATAAATTCAC 132372 Query 205430 ATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACAT 205489 ||||| | || | | ||||| ||||| || ||||| |||| ||| | | Sbjct 132373 CTGGTTCCATATCACAAACGTGTGCTATCATGATGGTTAATAATGCATAAGAAGCGATGT 132432 Query 205490 TAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATG-TAAGATA- 205547 | || ||||| || | |||||||||| ||||||||||||| ||||| |||| Sbjct 132433 TGAACGGTACTCCAAGACCCATATCACAAGATCTTTGATACAAGCAACATGATAAGCGTG 132492 Query 205548 -TTTATTA------TTA-----ATT-ACATGAAATTGTACAAAACA-ATGACAAGGTGGT 205593 |||| | ||| ||| || | |||||| || |||| |||||| |||||| Sbjct 132493 GTTTACCACCATCCTTAGGAAAATTGACGTAAAATTGG-CAGAACATATGACATGGTGGT 132551 Query 205594 ATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCA 205653 | |||| | || ||| |||||||| || ||| || || ||||| | Sbjct 132552 AGGGCCATCAATGGAAAATCAGGTGGATTCCAAGCACTTAGAATAATCCTTCTATCGTAT 132611 Query 205654 GGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAA 205713 ||| | | ||| |||||| |||| | | ||||||||| | ||||| || || ||| Sbjct 132612 GGTGTTTCTTTGATTTTACGAATAACTTCTTGTAATTGATCGACACCTTGGTTGGTGTAA 132671 Query 205714 TTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGG 205772 | ||| || || |||| || || ||||| || | |||||| ||||| |||||||| Sbjct 132672 TCATCATCACAGGTCT-TATACTTGGCCCCAAAGTGTCTCCATTGGAAACCGTAAACTGG 132730 Query 205773 ACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatcc 205832 || | ||||||||| |||||||| | | || | || ||||| | ||| || Sbjct 132731 GCCCAGGTCACCTTCTCTTCTATCAGTTAGTCCTATACCATCTAAATATTCTCTTGAGCC 132790 Query 205833 attttcatcccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGA 205892 ||| | ||||| || | | |||| | | || | || || ||| |||||| Sbjct 132791 ATTACCTTCCCAGATCTTAACACCTTGCTCACTCAGTTTTTTACCATCAGTACATCCAGC 132850 Query 205893 TATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAA 205952 || ||||||| ||||||| || || ||| | ||||| | ||| || || ||||| Sbjct 132851 AATGAACCATAGTAATTCTAAAATGATACCTTTGGTAAACACTTTTTTCGTAGTTAATAA 132910 Query 205953 TGGAAA 205958 |||||| Sbjct 132911 TGGAAA 132916 Score = 120 bits (132), Expect = 5e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| ||||||||||| ||||||||||||||||| | || ||||| || || Sbjct 158118 AAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAG 158059 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| || || |||| || || || || |||||||| ||||| ||| | ||| Sbjct 158058 CAATTAGAAGACGGTAGAACTCTATCTGACTACAACATTCAAAAGGAATCTACTCTACAT 157999 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| || | || |||||||||| Sbjct 157998 TTGGTTCTAAGATTGAGAGGTGGTAT 157973 >seq11 Length=890425 Score = 111 bits (122), Expect = 2e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| || | ||||| |||| || || ||||| ||| | || | ||| | Sbjct 89754 ACAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCC 89695 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || ||| ||| | || || || ||||| || |||||||| |||||||| Sbjct 89694 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 89635 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||||| | || ||||| || || ||||| || || || |||| || || || Sbjct 89634 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACTAC 89575 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || || ||||| ||||| || |||||||| || || | || |||||||| ||| || Sbjct 89574 AACATCCAAAAGGAATCTACCTTGCATTTAGTCCTAAGACTAAGAGGTGGTGGTAAGAA 89516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455839465600