Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq10 140 5e-28 seq11 104 3e-17 seq9 98.7 1e-15 seq12 95.1 2e-14 >seq10 Length=1371409 Score = 140 bits (154), Expect = 5e-28 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||| | ||||| ||||||||||||||||||| |||| || ||||| ||||| || Sbjct 920145 CCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGA-ATATTGTAATCGGA 920087 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||| | ||| || | ||| || || ||||| || | |||||| ||||| || || Sbjct 920086 CAGTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGTGG 920027 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 ||| ||||| |||||||| ||| |||||| ||| || Sbjct 920026 AATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCGAC 919967 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 ||| || || || |||||||| ||||| ||||||| || ||||||||| Sbjct 919966 TTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATT 919918 >seq11 Length=890425 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||||| || ||||| || |||||||| || || || || || || Sbjct 89525 CCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAT 89584 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || || ||||| || |||||||| ||||||||||| || || || || Sbjct 89585 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 89644 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 89645 ATACCTTCCTTGTCTTG 89661 >seq9 Length=2959652 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||||| || || || | |||||||| || || || || || || Sbjct 581468 CCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAT 581527 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || || ||||| || |||||||| ||||||||||| || || || ||| Sbjct 581528 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 581587 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 581588 ATACCTTCCTTGTCTTG 581604 >seq12 Length=876480 Score = 95.1 bits (104), Expect = 2e-14 Identities = 221/330 (67%), Gaps = 15/330 (5%) Strand=Plus/Plus Query 209093 GGATTTCATGTTCATGAATATGGTGATGTGAGTAATGGTTGTACATCAGCAGGAGAACAT 209152 || || ||| ||||||||| ||||||||| | |||||||||| ||||| || |||| Sbjct 102336 GGTTTCCATATTCATGAATTTGGTGATGTTACTAATGGTTGTGTTTCAGCTGGTCCACAT 102395 Query 209153 TTTAATCCA-TATAATAGACAACATGGAGATATTAGTGATAAAATACATCGTCATGTTGG 209211 ||||||||| | || |||| ||||| | | |||| ||| || | ||||| || Sbjct 102396 TTTAATCCATTCAAAAAGAC-TCATGGTGCACCAACTGATGAAA---ATAGACATGTAGG 102451 Query 209212 TGATTTTGGTAATGTGTATGCAGACGAAAATGGCGTTGCTAATATTGATTTTCACGATGA 209271 |||| | ||||| || | | || || ||||| |||||||| | | || ||| | Sbjct 102452 TGATATGGGTAACGTTCAAACTGATGATAATGGTGTTGCTAAAGGTACTATTACTGATAA 102511 Query 209272 TATTATATCATTGTGTGGAACAAATAATATAATAGGAAGAACATTAGTAGTTCATGATTC 209331 | || | | | || |||||| ||| || || ||| | | || ||||||| Sbjct 102512 CCTAATCAAACTATTAGGTCCAAATACTATTATTGGTAGATCTGTTGTTGTTCATGCAGG 102571 Query 209332 GCCTGATGATTTAGGAAAAACTGATCACCCTTTGAGTAA-----AACAAGTGGTAATTCT 209386 | ||||||||||| ||| || | | ||| || || | ||||||| || Sbjct 102572 TCAAGATGATTTAGGTAAAGGTGGTAA-----TGAAGAATCTTTAAAGACTGGTAATGCT 102626 Query 209387 GGCGGAAGATTAGGTTGTGGTATTATTGGT 209416 || || ||| || ||||||| |||||||| Sbjct 102627 GGTGGTAGACCAGCTTGTGGTGTTATTGGT 102656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526242000640