Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq15 192 1e-43 seq10 167 5e-36 seq11 165 2e-35 seq7 165 2e-35 seq9 147 5e-30 seq6 84.2 5e-11 >seq15 Length=791738 Score = 192 bits (212), Expect = 1e-43 Identities = 540/814 (66%), Gaps = 29/814 (4%) Strand=Plus/Minus Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||| ||||||| |||||| | ||| | ||| | || || |||||||| | Sbjct 509099 GCCTCTTTCTGGACTGCTGAAGAAATTGATTTATCTAAGGATCTACACGATTGGAACGTT 509040 Query 268820 TTAA--AACCAGAAGAAAGAAGATTTATATCT-TATATTCTT-GCGTTTTTTGCAGTTAG 268875 || |||| || || ||| | | |||| || | | || || || || || | | Sbjct 509039 AGAATGAACCCTAACGAA-AAGTTCTTCATCTCTAGAGTTTTAGCTTTCTTCGCTGCTTC 508981 Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||||||||||||||||||||| |||| || || |||| || || || | || || Sbjct 508980 TGATGGTATCGTTAACGAAAACTTAGTTGAAAATTTCTCCGCTGAAGTTCAAGTCCCAGA 508921 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||| | ||| ||||| ||||| || || ||||| ||||| || || | ||| Sbjct 508920 AGCTAAGGCTTTCTACGGTTTCCAAATTATGATTGAAAACATTCACTCTGAAACTTACTC 508861 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055 |||||| || ||||| ||||| | ||| || ||| || |||| | | || Sbjct 508860 TCTATTGATCGATACATATATCAAGGATCCAAAGGAATCTGAATTTTTATTCAATGCCAT 508801 Query 269056 GAGAACTATGG-ACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATA 269114 |||||| || | || |||| || ||||||||| | |||||| || || Sbjct 508800 TGAAACTATCCCACAAATTAAGGAAAAGG-CTCTATGGGCTCTAAGATGGATCAATGACT 508742 Query 269115 GCGCGCCTTAC---GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTT 269171 | ||| | ||||| |||||||||||||| || | |||||| | ||||| | Sbjct 508741 CTGATGCTTTGTTTGCTGAAAGATTAGTTGCTTTTGCTGCCATCGAAGGTGTTTTCTTCT 508682 Query 269172 CGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTT 269231 | || ||||| || ||||||| ||||||||||| ||||| | |||||||| || |||| Sbjct 508681 CTGGTTCTTTCGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTT 508622 Query 269232 TCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTAT 269291 |||||||||||||||| | || || |||||| ||||| || ||||||||| |||| | Sbjct 508621 TCTCTAACGAATTGATTTGTAGAGATGAAGGTCTACACACTGATTTCGCTTGTCTATTGT 508562 Query 269292 TTACTAATTATCTTTCA-CACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTC- 269349 || || | ||| | |||| || ||| |||| || ||||| || | | | Sbjct 508561 TTGCTCA----CTTGAAGAACAAGCCAACTCCAGAT---GTTGTCGAAAGAATTGTTACT 508509 Query 269350 --AGCTGTTTCTGTAGAAACAGA-ATTTCTAACGGAAGCTCTATCTATCGATCTTATCGG 269406 ||| || | |||| ||| || | | ||| ||| || | | | | | | || Sbjct 508508 GAAGCCGTCGAAATTGAAA-AGAGATACTTCATGGATGCTTTACCAGTTGCTTTACTAGG 508450 Query 269407 TATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTC 269466 |||||| | | ||||| |||| | | ||||| |||| |||||| | || | Sbjct 508449 TATGAACGCTGATTTGATGAACCAATACGTCGAATTCGTCGCTGACAGATTGTTAGTTGC 508390 Query 269467 TTTAGGGTTTAGTAAAAAATA---TAACGTTGAAAATCCGTTTAGTTTTATGGAGAATAT 269523 ||| || || ||||||| || || ||||| || || ||| ||||| || || Sbjct 508389 TTTCGG---TAACGAAAAATACTTCAAGGTCGAAAACCCATTCGATTTCATGGAAAACAT 508333 Query 269524 ATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557 || ||| |||||| |||| |||||||| ||| Sbjct 508332 CTCCCTAGCTGGTAAGACTAACTTCTTCGAAAAG 508299 >seq10 Length=1371409 Score = 167 bits (184), Expect = 5e-36 Identities = 185/246 (75%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || || || | |||||| |||||||| || |||||||| || || Sbjct 920148 ATACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCG 920089 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||| || || ||||| || || ||||| ||||| || ||||||||||| Sbjct 920088 GACAGTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGT 920029 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| |||||||| | || || || || | || || || ||| Sbjct 920028 GGAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCG 919969 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACA 104569 || || || ||||| || |||||||| | ||||| ||||| || |||| |||| || | Sbjct 919968 ACTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCA--TTGTTTATA 919911 Query 104570 GTATTT 104575 ||| || Sbjct 919910 GTAGTT 919905 >seq11 Length=890425 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||||||| || || |||| ||| || |||||||| || || || || ||||| ||| Sbjct 89525 CCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAT 89584 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||||||||||||||| | ||| || |||||||| || | || ||||| ||||| || Sbjct 89585 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 89644 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || || ||||| | || ||||| || | ||| ||| | ||| || Sbjct 89645 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGACT 89704 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || | ||||||||||||||||| | || || || || || |||||| || Sbjct 89705 TCCAAAGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTGTG 89755 >seq7 Length=452560 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || || | ||||| |||||||| || ||||| || |||||| Sbjct 157973 ATACCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCA 158032 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||||||||||||||||| ||| || |||||||| |||| || ||||||||||| Sbjct 158033 GATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGT 158092 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || ||||| | || ||||| || | ||| ||| | ||| Sbjct 158093 GGAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCG 158152 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || || | ||||| |||||||| || | ||||| || || Sbjct 158153 ACTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq9 Length=2959652 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || || |||| || | |||||||| || || || || |||||| Sbjct 581465 ATACCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCA 581524 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||||||||||||||| | ||| || |||||||| || | || ||||| ||||| Sbjct 581525 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 581584 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || || ||||| | || ||||| || | ||| ||| | ||| Sbjct 581585 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCG 581644 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || || | || || |||||||| || || ||||| || || Sbjct 581645 ACTTCCAAGGTGATGGTCTTACCTGTTAGAGTTTTGACGAA 581685 Score = 91.5 bits (100), Expect = 3e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAA-TACACGATCCTGTTTTACATATAGAGCT 165156 ||| | ||||||||| || | ||||| || ||| |||||| ||||||||||| || | Sbjct 515914 GATCAAGATGAATGGGATGCATGGAAACAACGTAC-CGATCCAGTTTTACATATTGAATT 515856 Query 165157 AAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGAT 165216 |||||||||||||||||| | | | ||||| ||||||||||| | || | ||||| Sbjct 515855 AAGAAGATGGGCAGATATTTTAGTAGTTGCACCATTAACAGCAAATACATTGTCTAAGAT 515796 Query 165217 AGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAAT 165268 || || | ||| |||| || ||||| || | || | || |||||| Sbjct 515795 TGCATTAGGCCTTTGTGATAATTTATTAACAAGTGTTATTCGTGCATGGAAT 515744 >seq6 Length=431213 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 165156 TAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGA 165215 || || | ||||||||||| | || || ||||| ||| |||| || |||||||| || Sbjct 381189 TACGACGTTGGGCAGATATTTTATTAATTGCACCTTTATCAGCTAATAGTTTAGCTAAAC 381130 Query 165216 TAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGA 165266 ||||||| ||||| ||||| || |||||||| || | |||||| |||| Sbjct 381129 TAGCTAATGGTATTTGTAACAATTTGTTAACCAGTGTCTTTAGAGATTGGA 381079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398149211036