Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04-
29] 17 sequences; 12,935,755 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq10 136 4e-27
seq7 104 2e-17
seq9 95.1 1e-14
seq11 87.8 2e-12
>seq10
Length=1371409
Score = 136 bits (150), Expect = 4e-27
Identities = 176/240 (73%), Gaps = 6/240 (3%)
Strand=Plus/Minus
Query 94772 TTTTACACT--CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGT 94829
|||||||| || ||||| |||| | ||||| || ||||||||||||||||| | |
Sbjct 920156 TTTTACACATACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATAT 920097
Query 94830 TATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
| |||||| || ||||| | |||||| || || || || ||||||||| ||||||
Sbjct 920096 TGTAATCGGACA--GTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTG 920039
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| || ||||||||||| || || | ||| || | ||||||| | | ||||||
Sbjct 920038 TTGATCAGGTGGAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTC 919979
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || | || || ||||| ||||| | |||||| ||||| || |||||
Sbjct 919978 TGAAGATTCGACTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 919919
>seq7
Length=452560
Score = 104 bits (114), Expect = 2e-17
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| | ||||| || | ||||||||||||||| | ||| || ||
Sbjct 157976 CCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAG-- 158033
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || || | || || || |||||||||||||||| ||||| || |
Sbjct 158034 ATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 158093
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||||||||| | || || | ||| || | | | ||||| | | ||||
Sbjct 158094 GAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGA 158153
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
| || | || ||||| || || || | |||||| || ||
Sbjct 158154 CTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193
>seq9
Length=2959652
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || | || ||||| | |||||||||||||| | ||| || ||
Sbjct 581468 CCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAG-- 581525
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || |||| || || || ||||||| |||||||| || || || |
Sbjct 581526 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 581585
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| ||||| | || || | |||||| | | | ||||| | | ||||
Sbjct 581586 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGA 581645
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
| || | |||||||| || || || |||||||| || ||
Sbjct 581646 CTTCCAAGGTGATGGTCTTACCTGTTAGAGTTTTGACGAA 581685
>seq11
Length=890425
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || | || || ||||| |||||||||||||| | ||| || |||
Sbjct 89525 CCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCG--G 89582
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || |||| || || || ||||||| |||||||| || || || |
Sbjct 89583 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 89642
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| |||||||| ||||| | || || | |||||| | | | ||||| | | ||||
Sbjct 89643 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGA 89702
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | || || || || ||||| | || || || || || |||||
Sbjct 89703 CTTCCAAAGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 89751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291104738120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |