Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq10 136 4e-27 seq7 104 2e-17 seq9 95.1 1e-14 seq11 87.8 2e-12 >seq10 Length=1371409 Score = 136 bits (150), Expect = 4e-27 Identities = 176/240 (73%), Gaps = 6/240 (3%) Strand=Plus/Minus Query 94772 TTTTACACT--CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGT 94829 |||||||| || ||||| |||| | ||||| || ||||||||||||||||| | | Sbjct 920156 TTTTACACATACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATAT 920097 Query 94830 TATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 | |||||| || ||||| | |||||| || || || || ||||||||| |||||| Sbjct 920096 TGTAATCGGACA--GTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTG 920039 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| || ||||||||||| || || | ||| || | ||||||| | | |||||| Sbjct 920038 TTGATCAGGTGGAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTC 919979 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | || || ||||| ||||| | |||||| ||||| || ||||| Sbjct 919978 TGAAGATTCGACTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 919919 >seq7 Length=452560 Score = 104 bits (114), Expect = 2e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | ||||| || | ||||||||||||||| | ||| || || Sbjct 157976 CCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAG-- 158033 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 |||| ||| | || || | || || || |||||||||||||||| ||||| || | Sbjct 158034 ATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 158093 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||||||||| | || || | ||| || | | | ||||| | | |||| Sbjct 158094 GAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGA 158153 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | || | || ||||| || || || | |||||| || || Sbjct 158154 CTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq9 Length=2959652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | || ||||| | |||||||||||||| | ||| || || Sbjct 581468 CCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAG-- 581525 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 |||| ||| | || |||| || || || ||||||| |||||||| || || || | Sbjct 581526 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 581585 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | || || | |||||| | | | ||||| | | |||| Sbjct 581586 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGA 581645 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | || | |||||||| || || || |||||||| || || Sbjct 581646 CTTCCAAGGTGATGGTCTTACCTGTTAGAGTTTTGACGAA 581685 >seq11 Length=890425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | || || ||||| |||||||||||||| | ||| || ||| Sbjct 89525 CCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCG--G 89582 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 |||| ||| | || |||| || || || ||||||| |||||||| || || || | Sbjct 89583 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 89642 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | |||||||| ||||| | || || | |||||| | | | ||||| | | |||| Sbjct 89643 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGA 89702 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || ||||| | || || || || || ||||| Sbjct 89703 CTTCCAAAGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 89751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291104738120