Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq11 140 2e-28 seq7 109 4e-19 seq10 104 2e-17 >seq11 Length=890425 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 109692 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 109633 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 109632 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 109598 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 118169 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 118110 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 118109 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 118075 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 107706 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 107647 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 107646 GCCAATATTTAGCTTTA 107630 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 116183 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 116124 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 116123 GCCAATATTTAGCTTTA 116107 >seq7 Length=452560 Score = 109 bits (120), Expect = 4e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | | |||||||| ||||| ||||||||||| ||||| |||| Sbjct 157974 TACCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAG 158033 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | |||| |||||||| || || ||||| |||| | ||||||||| | | Sbjct 158034 ATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 158093 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| || || ||| ||||| | | || || ||| | Sbjct 158094 GAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGA 158153 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308 |||| || ||||| || ||||| || || ||||| ||||| Sbjct 158154 CTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq10 Length=1371409 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | | |||||||| | ||| |||||||||||||||||||| | Sbjct 920147 TACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGG 920088 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | | || || | ||| || || ||||| ||||| | ||||||||| | | Sbjct 920087 ACAGTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGTG 920028 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || || ||| || ||| || || | | ||| ||| | ||| | Sbjct 920027 GAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCGA 919968 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 |||| | ||||| |||||||| || || ||||| || || || ||||| |||| Sbjct 919967 CTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTGTTTA 919913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947130603127