Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 145 7e-30 seq11 129 5e-25 seq7 122 8e-23 seq9 116 3e-21 >seq10 Length=1371409 Score = 145 bits (160), Expect = 7e-30 Identities = 175/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 |||||||||||| ||||| || ||||| || |||||| | || || | ||||| || || Sbjct 919915 AACAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACGATTACCCTGGAAGTCGAATC 919974 Query 25055 GTCTGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 || |||||||| || | || | ||| | || | ||| || || ||||| ||||||||| Sbjct 919975 TTCAGACACTATTGA-TAACGTCAAGTCTAAGATTCAA-GATAAGGAAGGTATTCCACCT 920032 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || ||||| | | || ||||| || || ||| | || |||| | | || || |||| Sbjct 920033 GATCAACAAAGACTAATCTTTGCAGGGAAGCAACTTGAGGATGGTAGAACACTGTCCGAT 920092 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| ||||| || ||||||| || ||||| ||||||| || Sbjct 920093 TACAATATTCAAAAGGAATCTACTTTACATTTGGTTCTAAGATTAAGAGGTGG 920145 >seq11 Length=890425 Score = 129 bits (142), Expect = 5e-25 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || ||||| || || ||||| | || || | ||||| || || Sbjct 89754 ACAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCC 89695 Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 || ||||| || || || || ||| || ||| ||||| ||||| || ||||||| Sbjct 89694 TCCGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTG 89637 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 ||||||| | | || ||||| || || ||||| ||||| | | | ||| | ||| | Sbjct 89636 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACT 89577 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| || ||||| ||||| || | |||||||| ||||| |||||||| || Sbjct 89576 ACAACATCCAAAAGGAATCTACCTTGCATTTAGTCCTAAGACTAAGAGGTGG 89525 >seq7 Length=452560 Score = 122 bits (134), Expect = 8e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || || ||||| || ||||| |||| || | ||||| || || || ||||| || Sbjct 158193 TTCGTCAAAACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCCTCCGACACCATT 158134 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||||||||| ||||||||||| ||||| | Sbjct 158133 GA--CAATGTTAAGTCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGAT 158076 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || || ||||||||||| | | | ||| | || ||||| ||||||| Sbjct 158075 TAATCTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTCTATCTGACTACAACATTCAAA 158016 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| || |||||||| || ||||| | ||||| || Sbjct 158015 AGGAATCTACTCTACATTTGGTTCTAAGATTGAGAGGTGG 157976 >seq9 Length=2959652 Score = 116 bits (128), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || || ||| | || ||||| ||||||| | ||||| || || || ||||| || Sbjct 581685 TTCGTCAAAACTCTAACAGGTAAGACCATCACCTTGGAAGTCGAATCCTCCGACACCATT 581626 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| ||||||||||||||||| | Sbjct 581625 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGAT 581568 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || || ||||| ||||| | | | ||| | || ||||| || |||| Sbjct 581567 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAA 581508 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| || || || ||||| ||||| |||||||| || Sbjct 581507 AGGAATCTACCCTTCACTTAGTCCTAAGACTAAGAGGTGG 581468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855