Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04-
29] 17 sequences; 12,935,755 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq9 172 1e-37
seq10 167 4e-36
seq11 165 2e-35
seq7 154 3e-32
>seq9
Length=2959652
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|| ||||| || || || || ||||||||||| || || || || || || || |||||
Sbjct 581486 ACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 581545
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || | |||||||||||| |||||||| ||||||||||||||
Sbjct 581546 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 581605
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| || |||||||| | ||||| ||||||||||||||||| ||
Sbjct 581606 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTGATGGTCTTA 581665
Query 68433 CCCGTGAGGGTCTTGACGAA 68452
|| || || || ||||||||
Sbjct 581666 CCTGTTAGAGTTTTGACGAA 581685
>seq10
Length=1371409
Score = 167 bits (184), Expect = 4e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| |||| || || || ||||| || || |||||||| ||||| || ||||| ||
Sbjct 920127 ACCAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGACAGTGTTCTACCATCCTCA 920068
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||||| || || || ||||||||||| || |||||||| |||||||| ||||||
Sbjct 920067 AGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGA 920008
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| || || ||||||| ||||| ||||||| ||| || |||||
Sbjct 920007 ATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCGACTTCCAGGGTAATCGTTTTA 919948
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | || || || || || ||||||
Sbjct 919947 CCAGTTAAAGTTTTAACAAAAATTTGCATT 919918
>seq11
Length=890425
Score = 165 bits (182), Expect = 2e-35
Identities = 157/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
|| || || ||||||||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 89555 GTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTACCGTCTTCCAATTGCTTACCA 89614
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || | |||||||||||| ||||| || |||||||||||||| ||||| | ||||
Sbjct 89615 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTG 89674
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| || |||||||| | ||||| |||||||| || || || || || || | ||||
Sbjct 89675 ACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATAGTCTTACCAGTTAAGGTC 89734
Query 68445 TTGACGAATATCTGCATTATG 68465
|||||||| || |||||| ||
Sbjct 89735 TTGACGAAAATTTGCATTGTG 89755
>seq7
Length=452560
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| ||||| || || || ||||| ||||| || || || || || || || ||||||
Sbjct 157994 ACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTACCGTCTTCT 158053
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || | ||||||||| || |||||||| ||||| ||||||||
Sbjct 158054 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 158113
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||| || || |||||||| | ||||| ||||||||||| ||||| ||
Sbjct 158114 ATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATGGTCTTA 158173
Query 68433 CCCGTGAGGGTCTTGACGAA 68452
|| || | || ||||||||
Sbjct 158174 CCTGTTAAAGTTTTGACGAA 158193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622204155240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |