Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq7 111 1e-19 seq11 100 2e-16 seq9 93.3 4e-14 >seq7 Length=452560 Score = 111 bits (122), Expect = 1e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || ||||| ||||| ||||| ||||||||| ||| ||| | || || || | Sbjct 158193 TTCGTCAAAACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCCTCCGACACCATT 158134 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || | ||| || ||| |||||||| || | || |||||||| ||| | Sbjct 158133 GACAATGTTAAGTCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTA 158074 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||| ||||| || |||| | | || || ||||||||||| Sbjct 158073 ATCTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTCTATCTGACTACAACATTCAAAAG 158014 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||||||||| || |||| ||||||| |||| || || || Sbjct 158013 GAATCTACTCTACATTTGGTTCTAAGATTGAGAGGTGGTATCAT 157970 >seq11 Length=890425 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || ||||| ||||| || ||||| ||| ||| | || Sbjct 89752 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCCTC 89693 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | || ||||| || ||| ||||| || || | || || || Sbjct 89692 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCA 89633 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || || ||||||||||| || |||| | |||| || || Sbjct 89632 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACTACAA 89573 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||| ||||| |||||||| |||| | || ||||| || |||| || Sbjct 89572 CATCCAAAAGGAATCTACCTTGCATTTAGTCCTAAGACTAAGAGGTGG 89525 >seq9 Length=2959652 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || ||||| |||| ||||| ||||| ||| ||| ||| | || || || | Sbjct 581685 TTCGTCAAAACTCTAACAGGTAAGACCATCACCTTGGAAGTCGAATCCTCCGACACCATT 581626 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| || ||| ||||| || || | || || ||||| ||| | Sbjct 581625 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTG 581566 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || |||| | | || || ||||| ||||| Sbjct 581565 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 581506 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 |||||||| || ||| | || ||||| || |||| || || || Sbjct 581505 GAATCTACCCTTCACTTAGTCCTAAGACTAAGAGGTGGTATCAT 581462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404711861443