Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 143 3e-29 >seq13 Length=1439985 Score = 143 bits (158), Expect = 3e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || ||| || || |||||||||||| |||||| || || ||||| || || Sbjct 356950 CATTGCTTCACTTGCAGCTGTACCTTCATCTAATAAAGATGCATTAGCAATTGGCAAGCC 356891 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| | ||| || || | ||||| |||| ||||| | ||| |||||||| |||||||| Sbjct 356890 TGTTAATTCAGTAATAATAGTTTGAAAATTTAATAACGATTCTAATCTTCCTTGAGATAT 356831 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 |||| |||||| ||||| || || || ||||| |||||| || | | |||| || Sbjct 356830 TTCAGGTTGATATGGAGTATACGAAGTATACCATTGAGGATTTTCTAATAAATTTCTTTG 356771 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082 || || || ||| ||| || |||||||| |||| || |||| Sbjct 356770 AATAACAGGTGGTAAAATAGTACCATAGTAACCTTTCCCAATAA 356727 Score = 141 bits (156), Expect = 1e-28 Identities = 174/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| | ||| || || ||||| ||||| ||||| |||||| |||||||||||| Sbjct 358686 ACCCCAATGGCACCAACACCTGGACCACCACCACCATGAGGAATAGCAAATGTCTTATGT 358627 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | |||||| ||||| ||||| || ||| | | ||| | || |||| || ||| Sbjct 358626 AGATTTAGGTGACAGACATCAGCGCCAAGGAAAGCTGGAGAGGTAAGTCCTAATTGGGCA 358567 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT--A 138360 || | ||||||||||| | ||| || ||||||||||| || ||||| || || | | Sbjct 358566 TTCATGTTTGCACCATCCAAATAGACTTGACCACCATTTTCGTGAACAATATTGATTGCA 358507 Query 138361 TCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA 138416 |||| ||| || |||| ||| ||||| ||| ||||| || |||||||||||| Sbjct 358506 TCTG--TGACACCTGGTTCATATAGACCATAAGTTGATGGGTAAGTAATCATAATA 358453 Score = 120 bits (132), Expect = 4e-22 Identities = 183/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || |||| ||||||||| | |||| | | | ||||| || | || ||||| || Sbjct 357567 CCTTCTGGACCATGATAGACGACATACATAGCGGCAATATTAGCCAACAAGGCTTGAGCA 357508 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || || ||| || |||||||| | | ||||||| || ||||| ||||| |||||| Sbjct 357507 GTACAAATATTAGAAGTAGCTTTGTCACGTTTAATATGTTGTTCTCTTGTTTGAAGTGCT 357448 Query 139383 AATCTGTATGCAGGATTGCCT--TCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTA 139440 |||||| | || | || ||| || | | |||||| ||| |||||||| || || | Sbjct 357447 AATCTGAAGGCTTGGTTACCTAATCTATCTTTACTGAC--ACCAACAATTCTACCTGGAA 357390 Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 ||||||| | || | ||| | || || ||||||||||| || ||| | |||| Sbjct 357389 TCTTTCTACTCAGTTTATTTGTAACGGAGAAAAAAGCAGCATGAGGTCCACCGAACCCCA 357330 Query 139501 TAGGAATACCAAACCTTTG 139519 | |||| |||||| ||||| Sbjct 357329 TCGGAACACCAAATCTTTG 357311 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 137789 CATAGCATCTACAAATCTTTGCAACTCAT-CGAGTGACTCAGACTCTGTGGGTTCTACCA 137847 ||| ||||| |||||||| | ||| |||| | ||| ||||| || || |||||||||| Sbjct 359146 CATTGCATCAACAAATCTGTTCAATTCATTCAAGTCT-TCAGATTCGGTTGGTTCTACCA 359088 Query 137848 TCATAGTTCCTAACACAGGCCACGATAGTGTAGGTGCATGAAATCCATAGTCCATAAGTC 137907 | | ||| || ||||| | | | ||||| ||||| |||||||||||| |||| Sbjct 359087 TTAAAGTACCCGGAACAGGGAAAGCCAAAGTAGGAGCATGGAATCCATAGTCCTGTAGTC 359028 Query 137908 TCTTTGCTATATCT 137921 ||||||| |||||| Sbjct 359027 TCTTTGCGATATCT 359014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840