Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq15 172 8e-38 seq10 141 1e-28 seq11 120 4e-22 seq7 104 3e-17 seq9 98.7 1e-15 >seq15 Length=791738 Score = 172 bits (190), Expect = 8e-38 Identities = 541/824 (66%), Gaps = 24/824 (3%) Strand=Plus/Plus Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938 ||| | || |||||||| || ||||| || | | || || | ||| ||||| ||| Sbjct 508294 ACTCTCTTTTCGAAGAAGTTAGTCTTACCAGCTAGGGAGATGTTTTCCATGAAATCGAAT 508353 Query 17939 GGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATAATAATCTATCTGCTACA 17998 || || | || | |||||||| | || | ||| ||||| || || || Sbjct 508354 GGGTTTTCGACCTTGAAGTATTTTTCGTTACCGAAAGCAACTAACAATCTGTCAGCGACG 508413 Query 17999 AATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGCA 18058 |||||||| ||||| ||||||||| ||||||||||||| | |||| |||| Sbjct 508414 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCTAGTAAAGCAACTGGTAAAGCA 508473 Query 18059 TCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACC----C 18113 || || | || ||||| || || || || | || | | || || || | Sbjct 508474 TCCATGAAGTATCTCTTT-TCAATTTCGACGGCTTCAGTAACAATTCTTTCGACAACATC 508532 Query 18114 TAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGT 18173 | || || ||| || || | | |||| | | |||| ||| || |||||||||| Sbjct 508533 TGGAGTT-GGC---TTGTTCTTCAAGTGAGCAAAC---AATAGACAAGCGAAATCAGTGT 508585 Query 18174 GTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTC 18233 ||| |||||||||||| | || ||||||||| || || || || ||||| | ||||| Sbjct 508586 GTAGACCTTCATCTCTACAAATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTC 508645 Query 18234 ttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACG 18293 | || || | ||| || || || |||||| || ||| ||||| | ||| || | | | Sbjct 508646 TCTTCTTCAACCAGAAGATAGAAGCGAAAGAACCAGAGAAGAAAACACCTTCGATGGCAG 508705 Query 18294 CGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAGT-ATCCATTTTTGTGC 18351 | || || | ||||||||||||||| | | | | | | ||| | |||||| || | || Sbjct 508706 CAAAAGCAACTAATCTTTCAGCAAACAAAGCA-TCAGAG-TCATTGATCCATCTTAGAGC 508763 Query 18352 CCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTT 18411 |||| | | || || ||| | || || ||||| || ||| || Sbjct 508764 CCATAGAGCCTTTTCCTTAATTTGTGGGATAGTTTCAATGGCATTGAATAAAAATTCAGA 508823 Query 18412 TTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCT 18471 ||| || | ||| || ||||| || ||||| || | ||| || ||||||| || ||| | Sbjct 508824 TTCCTTTGGATCCTTGATATATGTATCGATCAATAGAGAGTAAGTTTCAGAGTGAATGTT 508883 Query 18472 TTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC-GCTAT 18530 ||| || || || |||| || || | |||| || || ||||| || || Sbjct 508884 TTCAATCATAATTTGGAAACCGTAGAAAGCCTTAGCTTCTGGGACTTGAACTTCAGCGGA 508943 Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590 |||| |||| || || || || ||||| ||||| |||| || ||||| || || |||| Sbjct 508944 GAAAT-TTTCAACTAAGTTTTCGTTAACGATACCATCAGAAGCAGCGAAGAAAGCTAAAA 509002 Query 18591 CATATTTA-ATGAAATGTTTTTCATTA---TCCTTGAGATTGTTCCATTCATCTATATCT 18646 | | | | ||||| ||||| ||| | | | | |||||| || | || ||| Sbjct 509003 C-TCTAGAGATGAAGAACTTTTCGTTAGGGTTCATTCTAACGTTCCAATCGTGTAGATCC 509061 Query 18647 TTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690 || |||| ||||| |||||| | ||||| ||||| | ||| || Sbjct 509062 TTAGATAAATCAATTTCTTCAGCAGTCCAGAAAGAGGCTTCAGC 509105 >seq10 Length=1371409 Score = 141 bits (156), Expect = 1e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| ||||||| || ||||| ||||| ||||| | ||||||||| ||| Sbjct 919918 AATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACGATTACCCTGGAAGTCGAATCTTC 919977 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | |||| ||||| || ||| || |||||||| ||||| || || || || || Sbjct 919978 AGACACTATTGATAACGTCAAGTCTAAGATTCAAGATAAGGAAGGTATTCCACCTGATCA 920037 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||||||| | || | ||| || ||||| || || ||| ||||| | || ||||| || Sbjct 920038 ACAAAGACTAATCTTTGCAGGGAAGCAACTTGAGGATGGTAGAACACTGTCCGATTACAA 920097 Query 156002 TATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || |||| | | || | ||||| || ||||||||||||| ||| Sbjct 920098 TAT-TCAAAAGGAATCTACTTTACATTTGGTTCTAAGATTAAGAGGTGGT 920146 >seq11 Length=890425 Score = 120 bits (132), Expect = 4e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || | || || || ||||| || |||||||| || ||||||||| || Sbjct 89752 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCCTC 89693 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || || || || ||||| || ||||| || || || || || Sbjct 89692 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCA 89633 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||||||||| | ||| |||||||| | ||||| |||||| |||| || || | Sbjct 89632 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACTACA- 89574 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | ||||||| || | || | |||||||| ||||| ||||||| |||| Sbjct 89573 -ACATCCAAAAGGAATCTACCTTGCATTTAGTCCTAAGACTAAGAGGTGGTG 89523 >seq7 Length=452560 Score = 104 bits (114), Expect = 3e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 ||||| || || || || || ||||| || ||||||||| || || | ||| || Sbjct 158187 AAAACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCCTCCGACACCATTGACAAT 158128 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || || || || ||||| |||||||| || || || || ||||||||||| || | | Sbjct 158127 GTTAAGTCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTAATCTTT 158068 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGC 156016 || |||||||| | ||||| |||||| |||| || || || || || ||| || | Sbjct 158067 GCTGGTAAGCAATTAGAAGACGGTAGAACTCTATCTGACTACAACAT-TCAAAAGGAATC 158009 Query 156017 GACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||||| || ||||||| ||||| ||| Sbjct 158008 TACTCTACATTTGGTTCTAAGATTGAGAGGTGGT 157975 >seq9 Length=2959652 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 ||||| | || || || || || || || ||||||||| || || | ||| || Sbjct 581679 AAAACTCTAACAGGTAAGACCATCACCTTGGAAGTCGAATCCTCCGACACCATTGACAAT 581620 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || || || || ||||| || ||||| || || || || |||||||||||||| | | Sbjct 581619 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTT 581560 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015 || |||||||| | ||||| |||||| |||| || || | | ||||||| || Sbjct 581559 GCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACA--ACATCCAAAAGGAAT 581502 Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || ||||| ||||| ||||| ||||||| ||| Sbjct 581501 CTACCCTTCACTTAGTCCTAAGACTAAGAGGTGGT 581467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871844477200