Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq10 167 4e-36 seq11 158 2e-33 seq7 152 9e-32 seq9 134 2e-26 >seq10 Length=1371409 Score = 167 bits (184), Expect = 4e-36 Identities = 181/239 (76%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || ||||||||||||| || || |||||| ||||| Sbjct 920148 ATACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCG 920089 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | ||| || || ||||| |||| ||| ||||| |||||| Sbjct 920088 GACAGTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGT 920029 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || ||| || || ||| ||||| ||||| ||||| Sbjct 920028 GGAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCG 919969 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATA 172078 ||||| || ||||| |||||||||||||| ||||||| || || |||||| | ||||| Sbjct 919968 ACTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTGT-TTATA 919911 >seq11 Length=890425 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| |||| || |||||||| || |||| || || || || Sbjct 89516 TTCTTACCACCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTG 89575 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || |||| || || |||| |||||||| ||||||||||| || ||||| |||||| Sbjct 89576 TAGTCGGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 89635 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || || || ||||| || || || || Sbjct 89636 TCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAG 89695 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||| | |||||| || ||||||||||| || || | ||| || |||||| Sbjct 89696 GATTCGACTTCCAAAGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 89752 >seq7 Length=452560 Score = 152 bits (168), Expect = 9e-32 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || || ||||||| ||||| || || ||| || || Sbjct 157970 ATGATACCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAG 158029 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| || || |||| || ||||| ||||||||||| |||||||| ||||| ||| Sbjct 158030 TCAGATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCA 158089 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||| ||||| || || || ||||| || || || || ||| Sbjct 158090 GGTGGAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGAT 158149 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||| | |||||||| ||||| ||||| ||||| | ||| Sbjct 158150 TCGACTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq9 Length=2959652 Score = 134 bits (148), Expect = 2e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| |||| || ||||| || | |||| || || || || || Sbjct 581462 ATGATACCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAG 581521 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| || || |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 581522 TCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 581581 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || ||||| || || || || ||| Sbjct 581582 GGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGAT 581641 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||| | || ||||| ||||| |||| ||||| | ||| Sbjct 581642 TCGACTTCCAAGGTGATGGTCTTACCTGTTAGAGTTTTGACGAA 581685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135807658600