Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10 136 3e-27 seq11 109 4e-19 seq7 109 4e-19 seq9 91.5 1e-13 >seq10 Length=1371409 Score = 136 bits (150), Expect = 3e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||||||| | || ||||| |||||||| || ||||| | | || | | ||| Sbjct 920130 AGAACCAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGACAGTGTTCTACCATCC 920071 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || || ||| | || | |||||| ||||| || |||||||| || || ||| Sbjct 920070 TCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTTGATCAGGTGGAATACCTTCCTTATCT 920011 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||||| | || | |||||| ||| ||| ||||| || || || || Sbjct 920010 TG-AATCTTAGACTTGACGTTATCAATAGTGTCTGAAGATTCGACTTCCAGGGTAATCGT 919952 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| |||||||| ||||||||||| || |||||| Sbjct 919951 TTTACCAGTTAAAGTTTTAACAAAAATTTGCATT 919918 >seq11 Length=890425 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || ||||| | || ||||| ||||| ||||| || || | | || | | || Sbjct 89540 AGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTACCGTCT 89599 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || |||||| | ||||||||||| || || || || ||||| || |||||| Sbjct 89600 TCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCT 89659 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | ||||| || ||| ||||| | ||| ||||| Sbjct 89660 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATAGTC 89719 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||||||||| || || || || |||||| Sbjct 89720 TTACCAGTTAAGGTCTTGACGAAAATTTGCATT 89752 >seq7 Length=452560 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || |||||||| || || ||||| ||||||||||| || || | Sbjct 157976 CCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAT 158035 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || |||||| | || |||||||| ||||| || ||| Sbjct 158036 AGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 158095 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | || || ||| | || | ||||| || ||| ||| Sbjct 158096 ATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGACT 158155 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 || | || || || || || ||||| ||||| || || Sbjct 158156 TCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq9 Length=2959652 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || || ||||| || ||||| ||||| ||||| || || | | || | | || Sbjct 581483 AGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCT 581542 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || |||||| | ||||||||||| || || || |||||||| || |||||| Sbjct 581543 TCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 581602 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | ||||| || ||| ||||| | || || || Sbjct 581603 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTGATGGTC 581662 Query 29755 TTGCCAGTTAAGGTTTTAACAAA 29777 || || |||| ||||| || || Sbjct 581663 TTACCTGTTAGAGTTTTGACGAA 581685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219120187397