Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 1e-15 seq9 86.0 8e-12 >seq7 Length=452560 Score = 98.7 bits (108), Expect = 1e-15 Identities = 192/280 (69%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 171562 ACTATACCATTACTTACTACaaaaaaaaTTGTATATACTAA---TATCCTTAAAGAACTT 171618 ||| | |||||| | ||||| |||||| || | ||| || |||| || |||| | Sbjct 132919 ACTTTTCCATTATTAACTACGAAAAAA---GTGTTTACCAAAGGTATCATTTTAGAATTA 132863 Query 171619 TTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTT 171678 ||||| | ||| || | |||||| ||| || | | ||| ||||||||| | Sbjct 132862 CTATGGTTCATTGCTGGATGTACTGATGGTAAAAAACTGAGTGAGCAAGGTGTTAAGATC 132803 Query 171679 TGGAATGATAATGGTTCTCGTGAATTTTTAGATT-TATGCGGGTTTACTGAAAGAAAAGA 171737 ||| | | |||||| || | |||| ||||||| ||| || | ||||| |||| ||| Sbjct 132802 TGGGAAGGTAATGGCTCAAGAGAATATTTAGATGGTATA-GGACTAACTGATAGAAGAGA 132744 Query 171738 AGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGA 171797 |||||| | || ||| |||| || || ||||||||||| ||||| | |||| Sbjct 132743 AGGTGACCTGGGCCCAGTTTACGGTTTCCAATGGAGACACTTTGGGGCCAAGTATAAGAC 132684 Query 171798 CTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTA 171837 |||| || |||||||| ||||| || || |||||| Sbjct 132683 CTGTGATGATGATTACACCAACCAAGGTGTCGATCAATTA 132644 >seq9 Length=2959652 Score = 86.0 bits (94), Expect = 8e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 193345 AAATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGC 193404 ||||||| | || ||||| ||||| || ||| | | ||| ||||| | ||||| || | Sbjct 1819065 AAATTTTCTTTGGTCCAACATATTATCAACGTTTAAGACATATGGTAGATGATAAGATTC 1819006 Query 193405 ATGCTAGAAGTCATGGGCAAGTGACTACTT-TACATCGACAACCAAATTGTGGTCGTTCT 193463 |||||||| || ||| | | || | | || || ||||||| | ||| | ||| Sbjct 1819005 ATGCTAGAGCTCGTGGTCCAATG-CAAGTTCTAACGAGACAACCTGTTGAAGGTAGATCT 1818947 Query 193464 CAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCT 193523 || ||| ||||||||||| || ||||||||| || ||||| | | || ||||| Sbjct 1818946 AGAGATGGTGGTTTAAGATTCGGTGAAATGGAACGTGATTGTATGATTGCTCACGGTGCC 1818887 Query 193524 ACTCAATTCTTAAATGAAAGA 193544 || |||||||| |||||| Sbjct 1818886 GCTGCGTTCTTAAAGGAAAGA 1818866 Score = 82.4 bits (90), Expect = 1e-10 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 50407 ACATTTAAAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 50466 ||||||| | | ||||| | | ||| |||||||||| ||||||||||| |||||| Sbjct 1518770 ACATTTAGATTAAATTTGTCAGTTACTTCTCCATATAATGCAGATTTTGATGGTGATGAA 1518711 Query 50467 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTA 50511 ||||||||||| ||||| ||||| | | | | | ||||||||| Sbjct 1518710 ATGAATTTACACGTTCCACAATCTGAGGAAACAAGGGCTGAATTA 1518666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531066437120