Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq10 187 5e-42 seq7 185 2e-41 seq11 170 4e-37 seq9 163 6e-35 >seq10 Length=1371409 Score = 187 bits (206), Expect = 5e-42 Identities = 200/261 (77%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 82573 TTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632 |||| ||| |||| ||||| || | ||||| || || | ||||||||| || || |||| Sbjct 920155 TTTA-CACATACCACCTCTTAATCTTAGAACCAAATGTAAAGTAGATTCCTTTTGAATAT 920097 Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 | ||||| || || ||||||| || || ||||| || || ||||||||||||||||||| Sbjct 920096 TGTAATCGGACAGTGTTCTACCATCCTCAAGTTGCTTCCCTGCAAAGATTAGTCTTTGTT 920037 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCAT 82752 |||| || || || |||||||||||||||||||| | || || || ||||| || || Sbjct 920036 GATCAGGTGGAATACCTTCCTTATCTTGAATCTTAGACTTGACGTTATCAATAGTGTCTG 919977 Query 82753 TAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT- 82811 || ||| ||||||| || ||||| || || || || || || ||||| || |||||| Sbjct 919976 AAGATTCGACTTCCAGGGTAATCGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATTG 919917 Query 82812 ATTATATT--TTTCTACTAAA 82830 ||||| | |||| | |||| Sbjct 919916 TTTATAGTAGTTTCCAATAAA 919896 >seq7 Length=452560 Score = 185 bits (204), Expect = 2e-41 Identities = 173/220 (79%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | ||||| || || ||||||||||| || || || || || |||| Sbjct 157974 TACCACCTCTCAATCTTAGAACCAAATGTAGAGTAGATTCCTTTTGAATGTTGTAGTCAG 158033 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||||| ||||||||||||||| ||| || ||||||||||||| |||||||||||| || | Sbjct 158034 ATAGAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 158093 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| ||||| | || ||||| ||||| || || | ||| | Sbjct 158094 GAATACCTTCTTTGTCTTGGATCTTGGACTTAACATTGTCAATGGTGTCGGAGGATTCGA 158153 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 ||||||| || || ||||| ||||| || || || || || Sbjct 158154 CTTCCAAGGTAATGGTCTTACCTGTTAAAGTTTTGACGAA 158193 >seq11 Length=890425 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | || ||||| |||| |||||||| || || || || || || || Sbjct 89524 ACCACCTCTTAGTCTTAGGACTAAATGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGA 89583 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 |||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || || Sbjct 89584 TAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 89643 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| | || ||||| ||||| || || | ||| || Sbjct 89644 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGAC 89703 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||||| || ||||| || || || ||||| || || || |||||| Sbjct 89704 TTCCAAAGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 89752 >seq9 Length=2959652 Score = 163 bits (180), Expect = 6e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | || |||||||| || |||||||| || || || || || |||| Sbjct 581466 TACCACCTCTTAGTCTTAGGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAG 581525 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || | Sbjct 581526 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 581585 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| | || ||||| ||||| || || | ||| | Sbjct 581586 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGATTCGA 581645 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||||| || || ||||| ||||| Sbjct 581646 CTTCCAAGGTGATGGTCTTACCTGT 581670 Score = 87.8 bits (96), Expect = 4e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 143948 AGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACT 144007 |||| ||||||| ||| | | |||||| || |||||||||| || ||||| ||| | Sbjct 515915 AGATCAAGATGAATGGGATGCATGGAAACAACGTACCGATCCAGTTTTACATATTGAATT 515856 Query 144008 TAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAAT 144067 || |||||||| ||| |||| | | || || |||||||||||||| || | || || Sbjct 515855 AAGAAGATGGGCAGATATTTTAGTAGTTGCACCATTAACAGCAAATACATTGTCTAAGAT 515796 Query 144068 AGCCAATGGTATATGCGATAATTTACTAACA 144098 || || | || ||||||||| ||||| Sbjct 515795 TGCATTAGGCCTTTGTGATAATTTATTAACA 515765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826986145763