Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04-
29] 17 sequences; 12,935,755 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq16 284 3e-71
seq9 215 1e-50
seq6 107 5e-18
>seq16
Length=1413868
Score = 284 bits (314), Expect = 3e-71
Identities = 595/873 (68%), Gaps = 24/873 (3%)
Strand=Plus/Minus
Query 110299 TTGACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGA 110358
|| |||||||||||||||| ||| | |||||| |||||||| | | | ||||| |
Sbjct 1038501 TTAACTATTTTGGTTTCAAGACTTTGGAACGTTCTTATTTATTAAGAATTAATGGTAAAG 1038442
Query 110359 TCATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATA 110418
|| ||||||||| ||||| | || | | ||||| |||||||||||||| |||
Sbjct 1038441 TCGCTGAACGTCCACAACATTTAATTATGAGAGTTGCCATTGGTATTCATGGTAGAGATT 1038382
Query 110419 TTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACT 110477
| ||| || | | ||| |||| || || | | || || | | | ||||||| ||
Sbjct 1038381 TGGAAGGTGCTTTAGAAACTTATAATTTAATGTCTCTAA-GATATTTCACTCATGCTTCT 1038323
Query 110478 CCTACCCTATTTAACGCAGGAACT--AATGGAGGACAATTGGCTTCTTGCTTTCTTC-TA 110534
|| || |||| || || || ||| || | ||| || ||||||| |||||| |
Sbjct 1038322 CCAACTTTATTCAATGCTGGTACTCCAAAGCCT--CAAATGTCTTCTTG-TTTCTTAGTT 1038266
Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATT 110594
| || || || |||||||||||||||||||| ||| |||| |||||| |||| | |||
Sbjct 1038265 GCTATGAAAGAAGATTCTATTGAAGGTATTTACGATACTCTAAAAGAATGTGCTATGATT 1038206
Query 110595 TCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAAT 110654
|| || | |||| || |||||| | || ||||| | ||||| || | || | ||
Sbjct 1038205 TCCAAGACTGCTGGTGGTATTGGTTTACATATTCATAACATTCGTTCCACCGGTTCTTAT 1038146
Query 110655 ATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGAC 110714
|| || | || ||| |||| | || || |||||||| | ||||| ||||| ||
Sbjct 1038145 ATTGCTGGTACTAATGGTACTTCTAACGGTATTATTCCAATGGTTAGAGTTTTCAATAAC 1038086
Query 110715 ACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTC 110771
||||| ||||| ||||||||||| |||||| ||| | |||||| | || |
Sbjct 1038085 ACTGCTCGTTATGTCGATCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCTTTATACATT 1038026
Query 110772 GAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAA 110831
||||| ||||| | ||||| ||||| ||| | ||| | | || ||||| || | ||
Sbjct 1038025 GAACCATGGCACGCTGATATCTTTGATTTCATTGAAATCAGAAAGAATCACGG---TAAA 1037969
Query 110832 GAACAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAA 110888
||| ||| | || | |||||||| || | |||||| |||||||||||||| ||
Sbjct 1037968 GAAGAAATTCGTGCTAGAGATTTATTCCCAGCTTTATGGATTCCAGATTTATTCATGGAA 1037909
Query 110889 CGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCT 110948
|||||| || ||||| ||| || | | | ||| | | |||| |||||||||
Sbjct 1037908 CGTGTTGAATCTAATGGTGATTGGACTTTATTCTCTCCAAGTTCTGCTCCAGGTCTATCT 1037849
Query 110949 GATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTT 111008
||||| || || || | || | || |||||| || |||| ||||| ||
Sbjct 1037848 GATGTTTACGGTGAAAAATTCAAGGAACTTTACACTCGTTACGAAAGAGAAG----GTCG 1037793
Query 111009 CGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAAC 111067
| || | || | |||||| | | |||| ||||||||| | ||| ||||||
Sbjct 1037792 TGGTAAGACCATCAAGGCTCAAAAGTTATGGTATTCTATCCTTGAAGCTCAAACTGAAAC 1037733
Query 111068 TGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAA-TCTAATCAAATGAATT 111126
||| ||||| | || | || || ||| | ||| || ||| ||| |||| |||||
Sbjct 1037732 TGGTACTCCATTCGTTGTCTACAAGGATGCTTGTAA-CGAAAAGAGTAACCAAAAGAATT 1037674
Query 111127 TAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|||| || ||||| ||| ||| || || ||||
Sbjct 1037673 TAGGTACTATTAAATCTTCTAACTTATGTTGTG 1037641
Score = 93.3 bits (102), Expect = 1e-13
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 112981 TTATGAAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTG 113040
|||| || ||||| | ||||||| || |||| |||||||| || ||||| |||
Sbjct 1037154 TTATCAAGCATGGTCTAAGAAACTCTTTAACTATGGCCCCAATGCCAACTGCTTCTACTT 1037095
Query 113041 CACAGATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGAC 113100
| || ||||| ||| | |||||||||||||| ||||||||| |||||| || || |
Sbjct 1037094 CTCAAATTCTAGGTTACAATGAATGTTTCGAACCAATTACATCTAATATGTACCAACGTC 1037035
Query 113101 GTGTTCTAGCAGGTGAGTT 113119
||||| || | ||||| ||
Sbjct 1037034 GTGTTTTATCTGGTGAATT 1037016
>seq9
Length=2959652
Score = 215 bits (238), Expect = 1e-50
Identities = 537/803 (67%), Gaps = 22/803 (3%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| |||||||||||||| || |||||| | || |||||| | || |||| || | |
Sbjct 1588628 TACTTTGGTTTCAAAACCCTAGAACGTTCCTACTTACTTAGACTCGATGGTAAGGTTGCT 1588569
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCAT--GGACATGATATTA 110421
|||||||||||||| | || | | ||||| ||||||||||| |||| ||| |
Sbjct 1588568 GAACGTCCTCAACATTTAATTATGAGAGTTGCACTTGGTATTCATCTGGAC--GATTTAG 1588511
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAA-GTAAAAAGAAAGCTATTCATGCTACTCCT 110480
| ||||||||||| ||| | || | || || | | || ||||||| | ||
Sbjct 1588510 ATTCTGTTATTGAAACTTACAACTTAATGTCGTTAAGATACTT-TACTCATGCTTCACCA 1588452
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAAT 110539
|| |||||||| || || || | ||| || ||||||| |||||| | | ||
Sbjct 1588451 ACTCTATTTAATGCTGGTACACCAAAACCTCAAATGTCTTCTTG-TTTCTTAGTTGCTAT 1588393
Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599
|| ||||| || || |||||||||||||| || | || ||| |||| | || || ||
Sbjct 1588392 GAAAGATGACTCCATCGAAGGTATTTATGACACTTTGAAGGAATGTGCTATGATCTCCAA 1588333
Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
|| |||| || ||||| | || | || | |||| | | || || | || ||
Sbjct 1588332 AACTGCTGGTGGTGTTGGTCTACATATCCACAACGTTCGTGCTACTGGTTCATACATTGC 1588273
Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719
| || ||| | || | ||| | | || ||| | ||||| ||||| |||| ||
Sbjct 1588272 TGGTACTAACGGTACATCTAATGGTATCATCCCTATGGTTAGAGTTTTCAATAACACAGC 1588213
Query 110720 AAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776
| || || ||||||||||||| |||| ||| | ||||| | | | | |||||
Sbjct 1588212 ACGTTACGTCGATCAAGGTGGTAATAAGAGACCTGGTGCTTTTGCCTTGTTTATTGAACC 1588153
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
||||| ||||||| ||||| ||| | || | | || ||||| || | ||||| |
Sbjct 1588152 ATGGCACGCAGATATTTTTGATTTCGTTGACATCAGAAAGAATCATGG---TAAAGAAGA 1588096
Query 110837 AA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893
|| | ||| | ||| |||| || ||||||||| |||||||||| ||||| |||||
Sbjct 1588095 AATTCGTGCAAGAGATCTATTCCCAGCTATGTGGATTCCAGATTTATTTATGAAGCGTGT 1588036
Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953
| ||| ||||| ||| ||||| | | ||| | | |||| ||||| || || ||
Sbjct 1588035 TGAAGCAAATGAACAATGGACTCTTTTCTCTCCAAGTGATGCTCCAGGTCTGTCCGACGT 1587976
Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013
||||| | ||||||||||| | ||| || |||| ||||||| || | |
Sbjct 1587975 TTATGGTGACGAGTTTGAAGAATTATACACCCGTTACGAAAGAGAAGGC-CGT---GGTA 1587920
Query 111014 ACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072
| | | || | |||||| || | |||| || | || |||| ||||||||| |
Sbjct 1587919 AGACAATCAAGGCTCAAAAATTATGGTATGGTATTTTAGAGGCACAGACTGAAACTGGTA 1587860
Query 111073 CTCCTTATATTTTGTATAAAGAT 111095
|||| | ||| | ||||| |||
Sbjct 1587859 CTCCATTTATGGTCTATAAGGAT 1587837
Score = 143 bits (158), Expect = 6e-29
Identities = 172/232 (74%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
||||||||| ||||| |||||| | |||||||| | || ||||||||||||||| |
Sbjct 1518857 GACAATGATCCAGTTCTTTTCAATCGTCAACCATCTTTACACAAAATGTCTATGATGTCA 1518798
Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAAT--GTAAGTGCTTGTACGC 305435
|| || ||||| || | || | |||||| |||||||| || ||| | | | |
Sbjct 1518797 CACAAGGTCAAGGTCGTTCCTTATTCTACATTTAGATTAAATTTGTCAGT--TACTTCTC 1518740
Query 305436 CTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTA 305495
| |||||||| ||||||||||| |||||||||||| | || || || ||||| ||| |
Sbjct 1518739 CATATAATGCAGATTTTGATGGTGATGAAATGAATTTACACGTTCCACAATCTGAGGAAA 1518680
Query 305496 CAATGACTGAATTATCAGAAATATGTTCTGTATCAAAACTTATCATTTCTCC 305547
||| | ||||||||||| || ||||| | || || || || |||||||
Sbjct 1518679 CAAGGGCTGAATTATCACAACTATGTGCCGTTCCACTACAGATTGTTTCTCC 1518628
Score = 122 bits (134), Expect = 2e-22
Identities = 363/538 (67%), Gaps = 33/538 (6%)
Strand=Plus/Minus
Query 304964 TTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATG 305023
||| ||||| || | ||||| | ||||||||| | ||| | || |||||||| ||
Sbjct 1088511 TTAGAGGGTTTT-GTCAACGTTTAAAAGGTAAACAAGGTAGATTTAGAGGTAATTTATCT 1088453
Query 305024 GGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTAGTC-- 305081
|| |||||||| |||||| | |||| || || | || ||| | ||||| ||
Sbjct 1088452 GGTAAACGTGTAGATTTTTCAGGTAGAACAGTTATTTCCCCAGATCC--AAATTTATCAA 1088395
Query 305082 TTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA 305141
|| ||||| | | |||||| | | | || | | ||||||| ||||| ||||| |
Sbjct 1088394 TTGATGAAGTTGCTGTTCCAGATAGAGTAGCAAAAGTATTAACATTCCCAGAAAAAGTGA 1088335
Query 305142 ACGAGAAAAATATTA-AACATTTGAGACGTTGTGTTCTTAATGG---AAATAGCAAGT-- 305195
| | | |||| | || ||| | || | | | ||||| |||| ||
Sbjct 1088334 CCATGTATAATAAGAGAAGATTACA-ACAATTAATATTAAATGGTCCAAAT-----GTTC 1088281
Query 305196 ATCCAGGTGCTCGTGCTGTTAT--AAAACACAAGCAAAAG-AAGACAATATCTTTGA-AC 305251
||||||||||| | | |||| |||| | | | | ||| |||| | |||| | ||
Sbjct 1088280 ATCCAGGTGCTAATTAT-TTATTGAAAAAAGATGAAGAAGCAAGAAGAAATCTACGTTAC 1088222
Query 305252 CAT-ATCGATTTAAAACAATTCAGTAAAATGCTTGAAAT-TAATGATATTGTTATCAGAC 305309
| |||| ||||||| | || ||||| || | || | |||||||||| ||||
Sbjct 1088221 GGTGATCG-TTTAAAATTAGCCA--AAAAT--TTAAGATATGGTGATATTGTTGAAAGAC 1088167
Query 305310 ATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTA 305369
||||| | || |||| ||| || |||||||| ||||| ||| | |||| | ||||||
Sbjct 1088166 ATTTGGAAGATGGTGATGTGGTCCTATTCAATAGACAACCTTCATTACATAGACTGTCTA 1088107
Query 305370 TGATGGCTCATAAAGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAAGTGC 305427
| || | ||| | | ||||| | || |||| || ||| |||| |||| | |||
Sbjct 1088106 TCTTGTCACATTATG-CAAAGATTCGTCCTTGGAGA-ACTTTTAGATTGAATGAATGTGT 1088049
Query 305428 TTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
||||| || |||||||| ||||||||||| |||||||||||| | || || || |||
Sbjct 1088048 ATGTACTCCATATAATGCAGATTTTGATGGTGATGAAATGAATTTACACGTTCCGCAA 1087991
Score = 93.3 bits (102), Expect = 1e-13
Identities = 140/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 167202 AATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTATCG 167261
|||| ||||||||| || ||| | | | | | ||||||| |||| |||||||
Sbjct 340649 AATAATTCAAAAGAACATAATAAACCGTCACTGACACTCATTACTGCACCCCAATTATCG 340708
Query 167262 AATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAATAA 167320
|| ||| | || ||||| |||||||| || || || ||||| | |||| ||| ||
Sbjct 340709 AACTCAC-CACAGTAATTCGGTGCTGAGAAAACTGTCACTAAACTTCGATCATTAAAGAA 340767
Query 167321 TTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTCAACTCCTAttttttt 167380
||| ||||| ||||||||||| ||| ||||| ||||| |||| ||| | ||| ||
Sbjct 340768 TTCGTAACCGTCTTCAACAACCATATGTGCACGACACACAAGATCAAATCCGAATTTGTT 340827
Query 167381 AAGAAAATTAGTTAA 167395
| |||||| |||||
Sbjct 340828 TA-AAAATTTGTTAA 340841
Score = 89.7 bits (98), Expect = 1e-12
Identities = 120/165 (73%), Gaps = 4/165 (2%)
Strand=Plus/Minus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCATCTC 304946
|||| |||| | ||||||| ||||||||||| ||||| || || | || ||| ||
Sbjct 1519280 CAATTTCATGTCGCAACATACATGGATAATGACATTGCAGGTCAACCA--CAAGCACTTC 1519223
Query 304947 AAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTA 305006
||| |||||| | || | || |||| | || | || ||||| || |||||||
Sbjct 1519222 AAAAATCTGGACGTCCAGTTAAATCTATTCGTGCTCGTTTAAAGGGTAAGGAAGGTCGTA 1519163
Query 305007 TTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAA 305051
| |||||||||||||||| || ||||||||||| ||| ||||
Sbjct 1519162 TCAGAGGTAATCTAATGGGTAAGCGTGTTGATTTCTCTGCTAGAA 1519118
>seq6
Length=431213
Score = 107 bits (118), Expect = 5e-18
Identities = 289/442 (65%), Gaps = 27/442 (6%)
Strand=Plus/Minus
Query 167490 AACCCCTTATCAGGGATATCAATAGGTTTTTTAATCCT---ATTGATATCTTCTAATTTA 167546
|| || ||||| ||||||||| | ||| | ||| | ||| || | | ||| ||
Sbjct 261844 AATCCATTATCTGGGATATCAGTTGGTCTGGCAATATTTTTATTAATTTGATTTAAATTT 261785
Query 167547 TTAATATCTTCAGTGATTCCACCATGAACACAAAAAGCCAATGGATTATCAATTGTTATT 167606
|| | ||| || ||| |||||||| |||||||| |||| || | |||
Sbjct 261784 TTCAAATCAGGAGAGATACCACCATGGACACAAAA--------GATT-----TTATCATT 261738
Query 167607 CCAATGGTTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTT 167666
||| || |||||||| | | | | || ||||||||||| |||||| | |||
Sbjct 261737 --AATTGTAGCAGCAATTGGTAAACAATTGAACACATCGATGAATGCTTTCCAAACTTTA 261680
Query 167667 ATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATA-GTCTCTTGAGATATCAGCACA 167725
| || | ||||| |||||||| || |||||||| ||| ||| | || ||| |
Sbjct 261679 GTTGATTTTCTACGTTTACATTCATCATAGAAACCATACATCT-TTGTAACATTTGCAGA 261621
Query 167726 TTCGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAA 167785
||| ||||| |||||||| | || | |||||| | || |||| |||
Sbjct 261620 TTCATGATTACCTCTTAACATAAAGAAATTATTTGGATATTTCAGTTTATAACAAAGTAA 261561
Query 167786 TAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATATATA 167845
| ||||| ||||| | |||| ||| | ||||| |||||| ||||| |||| |||
Sbjct 261560 AAGTAAAATGGTTTCAAGAGATTGTTTACCACGATCAATATAATCTCCTAAGAATAAATA 261501
Query 167846 TTTATTTTGGTTT--GAAGGATTATCTAGTTTTTTAAAAATATTCAATAAATCACTAAAT 167903
||||| | || || || | | || ||||| | ||||||||| |||||
Sbjct 261500 -----GTTGGTCTCAGATGGGATACCACTCATCTTCAAAATTCTTAATAAATCATTAAAT 261446
Query 167904 TGACCATGTAAATCACCTACAA 167925
|| ||||| | |||||| ||||
Sbjct 261445 TGGCCATGAAGATCACCAACAA 261424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |