Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq16 284 3e-71 seq9 215 1e-50 seq6 107 5e-18 >seq16 Length=1413868 Score = 284 bits (314), Expect = 3e-71 Identities = 595/873 (68%), Gaps = 24/873 (3%) Strand=Plus/Minus Query 110299 TTGACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGA 110358 || |||||||||||||||| ||| | |||||| |||||||| | | | ||||| | Sbjct 1038501 TTAACTATTTTGGTTTCAAGACTTTGGAACGTTCTTATTTATTAAGAATTAATGGTAAAG 1038442 Query 110359 TCATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATA 110418 || ||||||||| ||||| | || | | ||||| |||||||||||||| ||| Sbjct 1038441 TCGCTGAACGTCCACAACATTTAATTATGAGAGTTGCCATTGGTATTCATGGTAGAGATT 1038382 Query 110419 TTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACT 110477 | ||| || | | ||| |||| || || | | || || | | | ||||||| || Sbjct 1038381 TGGAAGGTGCTTTAGAAACTTATAATTTAATGTCTCTAA-GATATTTCACTCATGCTTCT 1038323 Query 110478 CCTACCCTATTTAACGCAGGAACT--AATGGAGGACAATTGGCTTCTTGCTTTCTTC-TA 110534 || || |||| || || || ||| || | ||| || ||||||| |||||| | Sbjct 1038322 CCAACTTTATTCAATGCTGGTACTCCAAAGCCT--CAAATGTCTTCTTG-TTTCTTAGTT 1038266 Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATT 110594 | || || || |||||||||||||||||||| ||| |||| |||||| |||| | ||| Sbjct 1038265 GCTATGAAAGAAGATTCTATTGAAGGTATTTACGATACTCTAAAAGAATGTGCTATGATT 1038206 Query 110595 TCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAAT 110654 || || | |||| || |||||| | || ||||| | ||||| || | || | || Sbjct 1038205 TCCAAGACTGCTGGTGGTATTGGTTTACATATTCATAACATTCGTTCCACCGGTTCTTAT 1038146 Query 110655 ATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGAC 110714 || || | || ||| |||| | || || |||||||| | ||||| ||||| || Sbjct 1038145 ATTGCTGGTACTAATGGTACTTCTAACGGTATTATTCCAATGGTTAGAGTTTTCAATAAC 1038086 Query 110715 ACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTC 110771 ||||| ||||| ||||||||||| |||||| ||| | |||||| | || | Sbjct 1038085 ACTGCTCGTTATGTCGATCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCTTTATACATT 1038026 Query 110772 GAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAA 110831 ||||| ||||| | ||||| ||||| ||| | ||| | | || ||||| || | || Sbjct 1038025 GAACCATGGCACGCTGATATCTTTGATTTCATTGAAATCAGAAAGAATCACGG---TAAA 1037969 Query 110832 GAACAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAA 110888 ||| ||| | || | |||||||| || | |||||| |||||||||||||| || Sbjct 1037968 GAAGAAATTCGTGCTAGAGATTTATTCCCAGCTTTATGGATTCCAGATTTATTCATGGAA 1037909 Query 110889 CGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCT 110948 |||||| || ||||| ||| || | | | ||| | | |||| ||||||||| Sbjct 1037908 CGTGTTGAATCTAATGGTGATTGGACTTTATTCTCTCCAAGTTCTGCTCCAGGTCTATCT 1037849 Query 110949 GATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTT 111008 ||||| || || || | || | || |||||| || |||| ||||| || Sbjct 1037848 GATGTTTACGGTGAAAAATTCAAGGAACTTTACACTCGTTACGAAAGAGAAG----GTCG 1037793 Query 111009 CGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAAC 111067 | || | || | |||||| | | |||| ||||||||| | ||| |||||| Sbjct 1037792 TGGTAAGACCATCAAGGCTCAAAAGTTATGGTATTCTATCCTTGAAGCTCAAACTGAAAC 1037733 Query 111068 TGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAA-TCTAATCAAATGAATT 111126 ||| ||||| | || | || || ||| | ||| || ||| ||| |||| ||||| Sbjct 1037732 TGGTACTCCATTCGTTGTCTACAAGGATGCTTGTAA-CGAAAAGAGTAACCAAAAGAATT 1037674 Query 111127 TAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||| || ||||| ||| ||| || || |||| Sbjct 1037673 TAGGTACTATTAAATCTTCTAACTTATGTTGTG 1037641 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 112981 TTATGAAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTG 113040 |||| || ||||| | ||||||| || |||| |||||||| || ||||| ||| Sbjct 1037154 TTATCAAGCATGGTCTAAGAAACTCTTTAACTATGGCCCCAATGCCAACTGCTTCTACTT 1037095 Query 113041 CACAGATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGAC 113100 | || ||||| ||| | |||||||||||||| ||||||||| |||||| || || | Sbjct 1037094 CTCAAATTCTAGGTTACAATGAATGTTTCGAACCAATTACATCTAATATGTACCAACGTC 1037035 Query 113101 GTGTTCTAGCAGGTGAGTT 113119 ||||| || | ||||| || Sbjct 1037034 GTGTTTTATCTGGTGAATT 1037016 >seq9 Length=2959652 Score = 215 bits (238), Expect = 1e-50 Identities = 537/803 (67%), Gaps = 22/803 (3%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || |||||||||||||| || |||||| | || |||||| | || |||| || | | Sbjct 1588628 TACTTTGGTTTCAAAACCCTAGAACGTTCCTACTTACTTAGACTCGATGGTAAGGTTGCT 1588569 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCAT--GGACATGATATTA 110421 |||||||||||||| | || | | ||||| ||||||||||| |||| ||| | Sbjct 1588568 GAACGTCCTCAACATTTAATTATGAGAGTTGCACTTGGTATTCATCTGGAC--GATTTAG 1588511 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAA-GTAAAAAGAAAGCTATTCATGCTACTCCT 110480 | ||||||||||| ||| | || | || || | | || ||||||| | || Sbjct 1588510 ATTCTGTTATTGAAACTTACAACTTAATGTCGTTAAGATACTT-TACTCATGCTTCACCA 1588452 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAAT 110539 || |||||||| || || || | ||| || ||||||| |||||| | | || Sbjct 1588451 ACTCTATTTAATGCTGGTACACCAAAACCTCAAATGTCTTCTTG-TTTCTTAGTTGCTAT 1588393 Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599 || ||||| || || |||||||||||||| || | || ||| |||| | || || || Sbjct 1588392 GAAAGATGACTCCATCGAAGGTATTTATGACACTTTGAAGGAATGTGCTATGATCTCCAA 1588333 Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 || |||| || ||||| | || | || | |||| | | || || | || || Sbjct 1588332 AACTGCTGGTGGTGTTGGTCTACATATCCACAACGTTCGTGCTACTGGTTCATACATTGC 1588273 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | || ||| | || | ||| | | || ||| | ||||| ||||| |||| || Sbjct 1588272 TGGTACTAACGGTACATCTAATGGTATCATCCCTATGGTTAGAGTTTTCAATAACACAGC 1588213 Query 110720 AAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 | || || ||||||||||||| |||| ||| | ||||| | | | | ||||| Sbjct 1588212 ACGTTACGTCGATCAAGGTGGTAATAAGAGACCTGGTGCTTTTGCCTTGTTTATTGAACC 1588153 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||| ||||||| ||||| ||| | || | | || ||||| || | ||||| | Sbjct 1588152 ATGGCACGCAGATATTTTTGATTTCGTTGACATCAGAAAGAATCATGG---TAAAGAAGA 1588096 Query 110837 AA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 || | ||| | ||| |||| || ||||||||| |||||||||| ||||| ||||| Sbjct 1588095 AATTCGTGCAAGAGATCTATTCCCAGCTATGTGGATTCCAGATTTATTTATGAAGCGTGT 1588036 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 | ||| ||||| ||| ||||| | | ||| | | |||| ||||| || || || Sbjct 1588035 TGAAGCAAATGAACAATGGACTCTTTTCTCTCCAAGTGATGCTCCAGGTCTGTCCGACGT 1587976 Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013 ||||| | ||||||||||| | ||| || |||| ||||||| || | | Sbjct 1587975 TTATGGTGACGAGTTTGAAGAATTATACACCCGTTACGAAAGAGAAGGC-CGT---GGTA 1587920 Query 111014 ACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072 | | | || | |||||| || | |||| || | || |||| ||||||||| | Sbjct 1587919 AGACAATCAAGGCTCAAAAATTATGGTATGGTATTTTAGAGGCACAGACTGAAACTGGTA 1587860 Query 111073 CTCCTTATATTTTGTATAAAGAT 111095 |||| | ||| | ||||| ||| Sbjct 1587859 CTCCATTTATGGTCTATAAGGAT 1587837 Score = 143 bits (158), Expect = 6e-29 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 ||||||||| ||||| |||||| | |||||||| | || ||||||||||||||| | Sbjct 1518857 GACAATGATCCAGTTCTTTTCAATCGTCAACCATCTTTACACAAAATGTCTATGATGTCA 1518798 Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAAT--GTAAGTGCTTGTACGC 305435 || || ||||| || | || | |||||| |||||||| || ||| | | | | Sbjct 1518797 CACAAGGTCAAGGTCGTTCCTTATTCTACATTTAGATTAAATTTGTCAGT--TACTTCTC 1518740 Query 305436 CTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTA 305495 | |||||||| ||||||||||| |||||||||||| | || || || ||||| ||| | Sbjct 1518739 CATATAATGCAGATTTTGATGGTGATGAAATGAATTTACACGTTCCACAATCTGAGGAAA 1518680 Query 305496 CAATGACTGAATTATCAGAAATATGTTCTGTATCAAAACTTATCATTTCTCC 305547 ||| | ||||||||||| || ||||| | || || || || ||||||| Sbjct 1518679 CAAGGGCTGAATTATCACAACTATGTGCCGTTCCACTACAGATTGTTTCTCC 1518628 Score = 122 bits (134), Expect = 2e-22 Identities = 363/538 (67%), Gaps = 33/538 (6%) Strand=Plus/Minus Query 304964 TTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATG 305023 ||| ||||| || | ||||| | ||||||||| | ||| | || |||||||| || Sbjct 1088511 TTAGAGGGTTTT-GTCAACGTTTAAAAGGTAAACAAGGTAGATTTAGAGGTAATTTATCT 1088453 Query 305024 GGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTAGTC-- 305081 || |||||||| |||||| | |||| || || | || ||| | ||||| || Sbjct 1088452 GGTAAACGTGTAGATTTTTCAGGTAGAACAGTTATTTCCCCAGATCC--AAATTTATCAA 1088395 Query 305082 TTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA 305141 || ||||| | | |||||| | | | || | | ||||||| ||||| ||||| | Sbjct 1088394 TTGATGAAGTTGCTGTTCCAGATAGAGTAGCAAAAGTATTAACATTCCCAGAAAAAGTGA 1088335 Query 305142 ACGAGAAAAATATTA-AACATTTGAGACGTTGTGTTCTTAATGG---AAATAGCAAGT-- 305195 | | | |||| | || ||| | || | | | ||||| |||| || Sbjct 1088334 CCATGTATAATAAGAGAAGATTACA-ACAATTAATATTAAATGGTCCAAAT-----GTTC 1088281 Query 305196 ATCCAGGTGCTCGTGCTGTTAT--AAAACACAAGCAAAAG-AAGACAATATCTTTGA-AC 305251 ||||||||||| | | |||| |||| | | | | ||| |||| | |||| | || Sbjct 1088280 ATCCAGGTGCTAATTAT-TTATTGAAAAAAGATGAAGAAGCAAGAAGAAATCTACGTTAC 1088222 Query 305252 CAT-ATCGATTTAAAACAATTCAGTAAAATGCTTGAAAT-TAATGATATTGTTATCAGAC 305309 | |||| ||||||| | || ||||| || | || | |||||||||| |||| Sbjct 1088221 GGTGATCG-TTTAAAATTAGCCA--AAAAT--TTAAGATATGGTGATATTGTTGAAAGAC 1088167 Query 305310 ATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTA 305369 ||||| | || |||| ||| || |||||||| ||||| ||| | |||| | |||||| Sbjct 1088166 ATTTGGAAGATGGTGATGTGGTCCTATTCAATAGACAACCTTCATTACATAGACTGTCTA 1088107 Query 305370 TGATGGCTCATAAAGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAAGTGC 305427 | || | ||| | | ||||| | || |||| || ||| |||| |||| | ||| Sbjct 1088106 TCTTGTCACATTATG-CAAAGATTCGTCCTTGGAGA-ACTTTTAGATTGAATGAATGTGT 1088049 Query 305428 TTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||| || |||||||| ||||||||||| |||||||||||| | || || || ||| Sbjct 1088048 ATGTACTCCATATAATGCAGATTTTGATGGTGATGAAATGAATTTACACGTTCCGCAA 1087991 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 167202 AATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTATCG 167261 |||| ||||||||| || ||| | | | | | ||||||| |||| ||||||| Sbjct 340649 AATAATTCAAAAGAACATAATAAACCGTCACTGACACTCATTACTGCACCCCAATTATCG 340708 Query 167262 AATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAATAA 167320 || ||| | || ||||| |||||||| || || || ||||| | |||| ||| || Sbjct 340709 AACTCAC-CACAGTAATTCGGTGCTGAGAAAACTGTCACTAAACTTCGATCATTAAAGAA 340767 Query 167321 TTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTCAACTCCTAttttttt 167380 ||| ||||| ||||||||||| ||| ||||| ||||| |||| ||| | ||| || Sbjct 340768 TTCGTAACCGTCTTCAACAACCATATGTGCACGACACACAAGATCAAATCCGAATTTGTT 340827 Query 167381 AAGAAAATTAGTTAA 167395 | |||||| ||||| Sbjct 340828 TA-AAAATTTGTTAA 340841 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/165 (73%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCATCTC 304946 |||| |||| | ||||||| ||||||||||| ||||| || || | || ||| || Sbjct 1519280 CAATTTCATGTCGCAACATACATGGATAATGACATTGCAGGTCAACCA--CAAGCACTTC 1519223 Query 304947 AAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTA 305006 ||| |||||| | || | || |||| | || | || ||||| || ||||||| Sbjct 1519222 AAAAATCTGGACGTCCAGTTAAATCTATTCGTGCTCGTTTAAAGGGTAAGGAAGGTCGTA 1519163 Query 305007 TTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAA 305051 | |||||||||||||||| || ||||||||||| ||| |||| Sbjct 1519162 TCAGAGGTAATCTAATGGGTAAGCGTGTTGATTTCTCTGCTAGAA 1519118 >seq6 Length=431213 Score = 107 bits (118), Expect = 5e-18 Identities = 289/442 (65%), Gaps = 27/442 (6%) Strand=Plus/Minus Query 167490 AACCCCTTATCAGGGATATCAATAGGTTTTTTAATCCT---ATTGATATCTTCTAATTTA 167546 || || ||||| ||||||||| | ||| | ||| | ||| || | | ||| || Sbjct 261844 AATCCATTATCTGGGATATCAGTTGGTCTGGCAATATTTTTATTAATTTGATTTAAATTT 261785 Query 167547 TTAATATCTTCAGTGATTCCACCATGAACACAAAAAGCCAATGGATTATCAATTGTTATT 167606 || | ||| || ||| |||||||| |||||||| |||| || | ||| Sbjct 261784 TTCAAATCAGGAGAGATACCACCATGGACACAAAA--------GATT-----TTATCATT 261738 Query 167607 CCAATGGTTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTT 167666 ||| || |||||||| | | | | || ||||||||||| |||||| | ||| Sbjct 261737 --AATTGTAGCAGCAATTGGTAAACAATTGAACACATCGATGAATGCTTTCCAAACTTTA 261680 Query 167667 ATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATA-GTCTCTTGAGATATCAGCACA 167725 | || | ||||| |||||||| || |||||||| ||| ||| | || ||| | Sbjct 261679 GTTGATTTTCTACGTTTACATTCATCATAGAAACCATACATCT-TTGTAACATTTGCAGA 261621 Query 167726 TTCGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAA 167785 ||| ||||| |||||||| | || | |||||| | || |||| ||| Sbjct 261620 TTCATGATTACCTCTTAACATAAAGAAATTATTTGGATATTTCAGTTTATAACAAAGTAA 261561 Query 167786 TAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATATATA 167845 | ||||| ||||| | |||| ||| | ||||| |||||| ||||| |||| ||| Sbjct 261560 AAGTAAAATGGTTTCAAGAGATTGTTTACCACGATCAATATAATCTCCTAAGAATAAATA 261501 Query 167846 TTTATTTTGGTTT--GAAGGATTATCTAGTTTTTTAAAAATATTCAATAAATCACTAAAT 167903 ||||| | || || || | | || ||||| | ||||||||| ||||| Sbjct 261500 -----GTTGGTCTCAGATGGGATACCACTCATCTTCAAAATTCTTAATAAATCATTAAAT 261446 Query 167904 TGACCATGTAAATCACCTACAA 167925 || ||||| | |||||| |||| Sbjct 261445 TGGCCATGAAGATCACCAACAA 261424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812541497337