Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq11 123 3e-23 seq10 109 6e-19 seq9 105 8e-18 seq7 95.1 1e-14 >seq11 Length=890425 Score = 123 bits (136), Expect = 3e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || || |||||||||||| | || || || || Sbjct 89752 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCCTC 89693 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||| | || || || |||||||| || || || || ||||| Sbjct 89692 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCA 89633 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||||||| | || || | | | || ||| | ||||| || Sbjct 89632 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACTACAA 89573 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 ||||||||||||| || | ||| ||||| Sbjct 89572 CATCCAAAAGGAATCTACCTTGCATTTAGTC 89542 >seq10 Length=1371409 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | || || || || ||||| || || || || || Sbjct 919918 AATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACGATTACCCTGGAAGTCGAATCTTC 919977 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | ||| |||| ||||| || ||||| || ||||| || || || Sbjct 919978 AGACACTATTGATAACGTCAAGTCTAAGATTCAAGATAAGGAAGGTATTCCACCTGATCA 920037 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | ||||| ||||| || |||||||| ||||||| | | || || | || || || Sbjct 920038 ACAAAGACTAATCTTTGCAGGGAAGCAACTTGAGGATGGTAGAACACTGTCCGATTACAA 920097 Query 27585 TGTCCAAAAGGAATCCACTCTTCAT 27609 | | ||||||||||| ||| | ||| Sbjct 920098 TATTCAAAAGGAATCTACTTTACAT 920122 >seq9 Length=2959652 Score = 105 bits (116), Expect = 8e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || ||||| || || || || ||||| || || | || || || || || | |||| Sbjct 581685 TTCGTCAAAACTCTAACAGGTAAGACCATCACCTTGGAAGTCGAATCCTCCGACACCATT 581626 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || || |||||||| || ||||| || ||||| || | | Sbjct 581625 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTG 581566 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || ||| | ||||| || |||||||| Sbjct 581565 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 581506 Query 27595 GAATCCACTCTTCATCTAGTC 27615 ||||| || ||||| ||||| Sbjct 581505 GAATCTACCCTTCACTTAGTC 581485 Score = 86.0 bits (94), Expect = 7e-12 Identities = 190/283 (67%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| || | ||||||||| || || || || || | | |||||||||||||||| Sbjct 1588192 CCACCTTGATCGACGTAACGTGCTGTGTTATTGAAAACTCTAACCATAGGGATGATACCA 1588251 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAA 81498 | || |||||| ||||| | || || || | || || || ||| ||| Sbjct 1588252 TTAGATGTACCGTTAGTACCAGCAATGTATGAACCAGTAGCACGAACGTTGTGGATATGT 1588311 Query 81499 AGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556 ||||| | ||||| | || ||| || ||| |||||| |||| || ||||||| Sbjct 1588312 AGACCAACACCACC--AGCAGTTTTGGAGATCATAGCACATTCCTTCAAAGTGTCATAAA 1588369 Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 | || |||||| || | |||||| ||| |||||||| ||||| ||||| || Sbjct 1588370 TACCTTCGATGGAGTCATCTTTCATAGCAACTAAGAAACAAGAAGACATTTGAGGTTTTG 1588429 Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 || || ||||| || || ||||| | || ||| | || || Sbjct 1588430 GTGTACCAGCATTAAATAGAGTTGGTGAAGCATGAGTAAAGTA 1588472 >seq7 Length=452560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || ||||| || | || || ||||| ||||| | || || || || || | |||| Sbjct 158193 TTCGTCAAAACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCCTCCGACACCATT 158134 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || || ||||| || || ||||| || || || || | || Sbjct 158133 GACAATGTTAAGTCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTA 158074 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || ||| | ||||| || | |||||| Sbjct 158073 ATCTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTCTATCTGACTACAACATTCAAAAG 158014 Query 27595 GAATCCACTCTTCAT 27609 ||||| ||||| ||| Sbjct 158013 GAATCTACTCTACAT 157999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310278809040