Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20saulgeensis_20[genbank_20GCA_5F900180425.1_202017-04- 29] 17 sequences; 12,935,755 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7 132 4e-26 seq11 129 5e-25 seq10 127 2e-24 seq9 109 5e-19 >seq7 Length=452560 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || |||||| | || || ||| | ||||| | ||||| ||| | |||||| | ||| Sbjct 158193 TTCGTCAAAACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCCTCCGACACCATT 158134 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || || || || |||||||||||||| || ||||| |||||||| | ||| Sbjct 158133 GACAATGTTAAGTCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTA 158074 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || ||||| |||||| || || | || || ||||||||||||||| Sbjct 158073 ATCTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTCTATCTGACTACAACATTCAAAAG 158014 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||||| | | ||| | ||||| || Sbjct 158013 GAATCTACTCTACATTTGGTTCTAAGATTGAGAGGTGGTAT 157973 >seq11 Length=890425 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || | || || ||| |||||||| | ||||| ||| | ||| Sbjct 89751 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACTTTGGAAGTCGAATCCTCC 89692 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 89691 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 89632 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || |||||||||||| || || | ||||| |||||| Sbjct 89631 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCCGACTACAAC 89572 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || |||||||| || ||||| ||||| || Sbjct 89571 ATCCAAAAGGAATCTACCTTGCATTTAGT 89543 >seq10 Length=1371409 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26980 TATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGG 27039 |||| | ||||| || ||||| |||||| | || || || | ||||| || ||||| | Sbjct 919911 TATAAACAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACGATTACCCTGGAAGTCG 919970 Query 27040 AACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCAC 27099 || | || ||| | ||||| | ||||| || |||||||| || ||||| || |||| Sbjct 919971 AATCTTCAGACACTATTGATAACGTCAAGTCTAAGATTCAAGATAAGGAAGGTATTCCAC 920030 Query 27100 CCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCG 27159 | |||||||| | |||| | || || || ||| | || || || || | |||| Sbjct 920031 CTGATCAACAAAGACTAATCTTTGCAGGGAAGCAACTTGAGGATGGTAGAACACTGTCCG 920090 Query 27160 ATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||||| ||||||||||| || || |||||||||||| Sbjct 920091 ATTACAATATTCAAAAGGAATCTACTTTACATTTGGTT 920128 >seq9 Length=2959652 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || |||||||| || || ||| | || || | ||||| ||| | |||||| | ||| Sbjct 581685 TTCGTCAAAACTCTAACAGGTAAGACCATCACCTTGGAAGTCGAATCCTCCGACACCATT 581626 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| ||||| || ||||| || ||||| | || Sbjct 581625 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTG 581566 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || |||||||||||| || || | || || |||||||| |||||| Sbjct 581565 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 581506 Query 27177 GAGTCGACCTTACATTTGGT 27196 || || ||| | || || || Sbjct 581505 GAATCTACCCTTCACTTAGT 581486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918307579840