Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 seq10 143 4e-29 seq4 114 2e-20 >seq3 Length=1031415 Score = 147 bits (162), Expect = 3e-30 Identities = 166/221 (75%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607 ||| | ||||| | || || || ||||| ||| |||| ||||| | ||| || ||| Sbjct 36881 TTTGTTAAGACTTTGACTGGTAAGACTATTACTTTAGAAGTTGAATCTTCTGACACCATT 36940 Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667 |||| | || || ||||||||||| |||||||| ||||||||||||||||| | Sbjct 36941 GATAATGTTAAGTCTAAGATTCAAGATAAGGAAGGTATTCCACCTGATCAACAAAGATTA 37000 Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727 || ||||| || ||||||||||| || || |||| ||| || ||||| || ||||| Sbjct 37001 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGACTATAACATCCAAAAG 37060 Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || ||||| ||||| | ||| |||||||||| Sbjct 37061 GAATCTAC-TTACATTTAGTTTTGAGATTAAGAGGTGGTAT 37100 Score = 114 bits (126), Expect = 2e-20 Identities = 333/506 (66%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 205359 TAATTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATG 205418 || ||| | ||| || ||| |||||| | ||| | ||| |||| ||| | | || Sbjct 62110 TATTTGCTCTTTCAAAGCATCAATATGGTCTCTATACACATGAGCATCACCCAATGTGTG 62051 Query 205419 AATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATA 205478 ||| |||||| |||| | || | ||||||||||||| || || | | || Sbjct 62050 AATGAATTCACCGGGTTCCATATCGACAATATGTGCAATCATAATGGTTAACAGAGCGTA 61991 Query 205479 ACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACA 205538 ||||| |||||||| ||||| | ||||||||| ||||||||||| | |||| Sbjct 61990 TGAAGCAATGTTAAATGGAACACCAAGGCCCATATCACAAGATCTTTGATATAAAAGACA 61931 Query 205539 TG-TAAGATA-----------TTTATTATT--AATTA-CATGAAATTGT-ACAAAACAAT 205582 || ||| | || ||| ||||| ||| ||||||| | || ||| | Sbjct 61930 TGATAATTTTGGTTTCCCACCTTCCTTAGGGAAATTAACATAAAATTGTGAGAAGACA-T 61872 Query 205583 GACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATAT 205642 |||| || |||| | |||| | | || || ||||| || | | || || Sbjct 61871 GACATGGAGGTAAAGCCATTTGGGGGAAGTCAGGTGGGTTCCAAGCACTCATGATGATTC 61812 Query 205643 TTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTT 205702 ||||| | || |||||||| | ||| ||||| || | |||||||| | |||| Sbjct 61811 TTCTATCGTATGGGTTATTTTTCAGTTTGAATATAACATCTTGCAATTGATCCACACCTT 61752 Query 205703 GATTTGTATAATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAA 205761 | || || | ||| || || ||||||| ||||||||||| | |||||| || Sbjct 61751 GTCCGGTGTAGTCATCATCGCACGTCT-TATATTTGGCACCAAAATGTCTCCATTGGAAC 61693 Query 205762 CCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATAT 205821 |||||||||||||||| ||||||||| | ||| | |||||| | || | || |||| Sbjct 61692 CCATAAACTGGACCTAGATCACCTTCACGACGATCTGTTAAACCAAGCTTGTCTAAATAT 61633 Query 205822 TTTAATGATCCATTTTCATCCCAAAT 205847 | |||||||| | |||||||| Sbjct 61632 TCACGGGATCCATTACCTTCCCAAAT 61607 >seq10 Length=639015 Score = 143 bits (158), Expect = 4e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || |||| || || || || || |||| ||||| | Sbjct 8642 AATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 8701 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || || |||||||| ||||||||||| |||||||| || Sbjct 8702 TGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCACCTGACCA 8761 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || || |||||||| ||| || |||| ||| || || || Sbjct 8762 ACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 8821 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| ||||| ||||| ||||| || ||| | ||| |||||||| ||| || Sbjct 8822 CATCCAAAAGGAATCCACTTTACATTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 8878 >seq4 Length=966351 Score = 114 bits (126), Expect = 2e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || || || || ||||| | ||| | Sbjct 913901 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAGACCATCACCCTAGAGGTGGAATCGTCC 913960 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || || ||||||||||| || || ||||| || ||| Sbjct 913961 GATACCATCGACAACGTGAAATCCAAGATCCAAGATAAAGAGGGGATCCCACCAGACCAA 914020 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || |||||||| |||||| | || ||| | ||||| || || || || Sbjct 914021 CAGCGTTTGATCTTTGCAGGTAAACAACTGGAAGATGGGAGAACACTATCCGACTACAAC 914080 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| ||||| ||||| ||||| || ||| | ||| |||||||||| ||| || Sbjct 914081 ATCCAAAAGGAATCCACTTTACATTTAGTCTTAAGATTAAGAGGTGGTATGCAAATTT 914138 Score = 113 bits (124), Expect = 7e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || || || || ||||| | ||| | Sbjct 914129 ATGCAAATTTTTGTGAAGACTTTGACTGGTAAGACCATCACCCTAGAGGTGGAATCGTCC 914188 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| || || ||||||||||| || || ||||| || ||| Sbjct 914189 GACACCATCGACAACGTGAAATCCAAGATCCAAGATAAAGAGGGGATCCCACCAGACCAA 914248 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || |||||||| |||||| | || ||| | ||||| || || || || Sbjct 914249 CAGCGTTTGATCTTTGCAGGTAAACAACTGGAAGATGGGAGAACACTATCCGACTACAAC 914308 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || ||||| ||||| ||||| ||||| |||||| | ||| ||||||| |||| Sbjct 914309 ATCCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTAAGAGGTGGGATTA 914360 Score = 96.9 bits (106), Expect = 5e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || || || || ||||| | ||| | Sbjct 913445 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAGACCATCACCCTAGAGGTGGAATCGTCC 913504 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || || ||||||||||| || || ||||| || ||| Sbjct 913505 GATACCATCGACAACGTGAAATCCAAGATCCAAGATAAAGAGGGGATCCCACCAGACCAA 913564 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || |||||||| |||||| | || ||| | ||||| || || || || Sbjct 913565 CAGCGTTTGATCTTTGCAGGTAAACAACTGGAAGATGGGAGAACACTATCCGACTACAAC 913624 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| || || ||| | || ||||| || | || |||||||||| ||| || Sbjct 913625 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTGAGACTAAGAGGTGGTATGCAAATTT 913682 Score = 96.9 bits (106), Expect = 5e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || || || || ||||| | ||| | Sbjct 913673 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAGACCATCACCCTAGAGGTGGAATCGTCC 913732 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || || ||||||||||| || || ||||| || ||| Sbjct 913733 GATACCATCGACAACGTGAAATCCAAGATCCAAGATAAAGAGGGGATCCCACCAGACCAA 913792 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || |||||||| |||||| | || ||| | ||||| || || || || Sbjct 913793 CAGCGTTTGATCTTTGCAGGTAAACAACTGGAAGATGGGAGAACACTATCCGACTACAAC 913852 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| || || ||| | || ||||| || | || |||||||||| ||| || Sbjct 913853 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTGAGACTAAGAGGTGGTATGCAAATTT 913910 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| | || || || || || || ||||| | ||| | Sbjct 913217 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACCCTAGAGGTGGAATCGTCC 913276 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || || ||||||||||| || || ||||| || ||| Sbjct 913277 GATACCATCGACAACGTGAAATCCAAGATCCAAGATAAAGAGGGGATCCCACCAGACCAA 913336 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || |||||||| |||||| | || ||| | ||||| || || || || Sbjct 913337 CAGCGTTTGATCTTTGCAGGTAAACAACTGGAAGATGGGAGAACACTATCCGACTACAAC 913396 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| || || ||| | || ||||| || | || |||||||||| ||| || Sbjct 913397 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTGAGACTAAGAGGTGGTATGCAAATTT 913454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455140668800