Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq4 105 7e-18 seq3 87.8 2e-12 seq10 86.0 6e-12 >seq4 Length=966351 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | ||||||||||| | || ||||| ||||| |||||||| ||| Sbjct 914355 CCACCTCTTAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914296 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| ||||| ||||||||||| ||| |||||| ||| || || || || || Sbjct 914295 AGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGG 914236 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || || || ||| | | || | ||||| | | ||| || Sbjct 914235 ATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTGTCGGACGATTCCACC 914176 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 914175 TCTAGGGTGATGGTCTTACCAGTCAAAGTCTTCACAAAAATTTGCATA 914128 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | || |||||||| | || ||||| ||||| |||||||| ||| Sbjct 914127 CCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914068 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| ||||| ||||||||||| ||| |||||| ||| || || || || || Sbjct 914067 AGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGG 914008 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || || || ||| | | || | || || | | ||| || Sbjct 914007 ATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCCACC 913948 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 913947 TCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCATA 913900 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| || || |||| || || || ||||| |||||||| ||| Sbjct 913443 CCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAT 913384 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| ||||| ||||||||||| ||| |||||| ||| || || || || || Sbjct 913383 AGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGG 913324 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || || || ||| | | || | || || | | ||| || Sbjct 913323 ATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCCACC 913264 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||| || || ||||| ||||||||| Sbjct 913263 TCTAGGGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCATA 913216 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| || || |||| || || || ||||| |||||||| ||| Sbjct 913671 CCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAT 913612 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| ||||| ||||||||||| ||| |||||| ||| || || || || || Sbjct 913611 AGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGG 913552 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || || || ||| | | || | || || | | ||| || Sbjct 913551 ATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCCACC 913492 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 913491 TCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCATA 913444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| || || |||| || || || ||||| |||||||| ||| Sbjct 913899 CCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAT 913840 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| ||||| ||||||||||| ||| |||||| ||| || || || || || Sbjct 913839 AGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGG 913780 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || || || ||| | | || | || || | | ||| || Sbjct 913779 ATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCCACC 913720 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 913719 TCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCATA 913672 >seq3 Length=1031415 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | |||||||||||| | |||||||| ||||| ||||| || || Sbjct 37097 CCACCTCTTAATCTCAAAACTAAATGTAA-GTAGATTCCTTTTGGATGTTATAGTCAGAT 37039 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || |||||| | ||||||||||||| |||| | | ||| ||||| || || Sbjct 37038 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 36979 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || ||| || || | | || | ||||| | | ||| ||| Sbjct 36978 ATACCTTCCTTATCTTGAATCTTAGACTTAACATTATCAATGGTGTCAGAAGATTCAACT 36919 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175 || | ||| | ||||| || ||||| || || || || Sbjct 36918 TCTAAAGTAATAGTCTTACCAGTCAAAGTCTTAACAAA 36881 >seq10 Length=639015 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | || |||||||| | || ||||| ||||| |||||||| || Sbjct 8869 CCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 8810 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | ||| ||||||||| |||| | | ||| || || || || Sbjct 8809 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 8750 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 8749 ATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8690 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||| || || || ||||| || || |||||||| Sbjct 8689 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 8643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013823271120