Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq14 279 1e-69 seq3 188 2e-42 seq10 176 1e-38 seq4 159 8e-34 >seq14 Length=553263 Score = 279 bits (308), Expect = 1e-69 Identities = 555/813 (68%), Gaps = 27/813 (3%) Strand=Plus/Plus Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||| ||||| | |||||| | ||| | | | || ||| |||||||| || Sbjct 154451 GCCTCTTTCTGGACCGCTGAAGAAATCGATTTAGGTAAGGATTTACACGATTGGAACAAC 154510 Query 268820 TTAA---AACCAGAAGAAAGAAGATTTATATCT-TATA-TTCTTGCGTTTTTTGCAGTTA 268874 || | ||| | |||| || | | ||||| || | ||||||| || || || | Sbjct 154511 AGAATGAATCCAAACGAAA--AGTTCTTTATCTCTAGAGTTCTTGCCTTCTTCGCTGCCT 154568 Query 268875 GTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG 268934 ||||||| | |||||||||||| |||| || || |||| | || || | || |||| Sbjct 154569 CTGATGGTCTTGTTAACGAAAATTTAGTCGAAAATTTCTCTGCTGAAGTTAATATCCCTG 154628 Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACA 268994 |||| | | || ||||| ||||| || || ||||| |||||||| || | || Sbjct 154629 AAGCTAAAGCATTCTACGGGTTCCAAATCATGATTGAAAACATTCATTCTGAAACCTATT 154688 Query 268995 GTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA 269054 ||| ||||| ||||| ||||| | ||| || ||| || || || | ||| Sbjct 154689 CTCTTTTAATCGATACATATATTAAAGATCCAAAGGAATCCGAATTCTTACTTAATGCTA 154748 Query 269055 TGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATA 269114 | |||||| | | | ||||| ||||||||||||| | |||||| | |||| Sbjct 154749 TCGAAACTATCCCTCAAATTAAAGAAAAAGCTGAATGGGCTCTTAGATGGATTCAAGATA 154808 Query 269115 GCG----CGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170 | | || ||| | ||||| ||||||||||| || || | |||||| | ||||| Sbjct 154809 GTGAAACCGTCTTT-GCTGAAAGATTAGTTGCTTTCGCTGCCATTGAAGGTGTCTTCTTC 154867 Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230 || || |||||||| | ||||||||||| ||||||||||| | |||||||| |||||| Sbjct 154868 TCAGGTTCTTTTGCTTCCATCTTTTGGTTAAAGAAAAGAGGGTTGATGCCAGGTTTAACT 154927 Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTA 269290 ||||| ||||||||||| | || || ||||||||||| ||| ||||||||| | | Sbjct 154928 TTCTCCAACGAATTGATTTGTAGAGATGAAGGTTTACATACCGATTTCGCTTGTCTTCTT 154987 Query 269291 TTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTAT---AGAT 269347 || || ||| | ||| ||||| |||| | ||| | ||||||| ||| Sbjct 154988 TTCGCTCATT---TAAAACATAAACCAGACCAAGCTGTTGTAGAAAAAATTATTACAGA- 155043 Query 269348 TCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGT 269407 ||||||| | |||| | || | | | || ||| || | ||| | | | ||| Sbjct 155044 --AGCTGTTGAAATTGAAAAAAGATATTTTATCGATGCTTTACCAGTCGCTTTATTAGGT 155101 Query 269408 ATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCT 269467 |||||| | | |||| ||||| || | ||||| |||||||||| | || || Sbjct 155102 ATGAATGCTGATTTAATGAATCAATATGTTGAATTCGTTGCTGATAGATTATTAGTCGCT 155161 Query 269468 TTAGGGTTTAGTAAAAAA---TATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATA 269524 || || || ||| ||| | |||||| |||||||| || ||| ||||| ||||| Sbjct 155162 TTCGG---TAATAAGAAATTCTTTAACGTCGAAAATCCATTCGATTTCATGGAAAATATC 155218 Query 269525 TCATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557 || |||| |||||| | ||||||||||| ||| Sbjct 155219 TCTTTAGCTGGTAAGACCAATTTCTTCGAAAAG 155251 >seq3 Length=1031415 Score = 188 bits (208), Expect = 2e-42 Identities = 175/221 (79%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | |||| |||||| |||||||| || || || ||||||||| Sbjct 37100 ATACCACCTCTTAATCTCAAAACTAAATGTAA-GTAGATTCCTTTTGGATGTTATAGTCA 37042 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||||||||||||||||| |||||| |||||||| |||| || ||||||||||| Sbjct 37041 GATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGT 36982 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| |||||||| | || ||||| || | ||| || || ||| Sbjct 36981 GGAATACCTTCCTTATCTTGAATCTTAGACTTAACATTATCAATGGTGTCAGAAGATTCA 36922 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || |||| ||||||||||||||||| | || || ||||| Sbjct 36921 ACTTCTAAAGTAATAGTCTTACCAGTCAAAGTCTTAACAAA 36881 Score = 113 bits (124), Expect = 1e-19 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 165104 GATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTAAGAAGA 165163 ||||||||| |||||||||| ||| | | ||||||||| ||||||| || || |||||| Sbjct 271942 GATGAATGGGATACTTGGAAACAAAGAAATGATCCTGTTCTACATATTGAACTTAGAAGA 272001 Query 165164 TGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGATAGCTAAC 165223 ||||||||||| | || || || || | ||||| || | ||| || ||||| | Sbjct 272002 TGGGCAGATATCTTATTAATTGCTCCACTGACAGCTAATACTTTGGCTAAGATTTCATTA 272061 Query 165224 GGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAAT 165268 || | ||| |||| || ||||| ||| | || ||||| |||||| Sbjct 272062 GGATTATGTGATAATTTATTAACCTGTGTCGTAAGAGCATGGAAT 272106 >seq10 Length=639015 Score = 176 bits (194), Expect = 1e-38 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| |||||| || ||||| || || || || ||||||||| Sbjct 8869 CCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 8810 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||||| ||| || |||||||| |||| || ||||| ||||| || Sbjct 8809 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGG 8750 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || |||||||| | || ||||| || | || || || ||| || Sbjct 8749 ATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8690 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| ||||| ||||||||||| | ||||| ||||| || |||||||| Sbjct 8689 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATTTT 8640 >seq4 Length=966351 Score = 159 bits (176), Expect = 8e-34 Identities = 179/238 (75%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 104323 TTTATTTATTCCC-CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATAT 104381 ||||| || |||| ||||||| || | |||| |||||| || ||||| || || || | Sbjct 914366 TTTATATAATCCCACCTCTTAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGGATGT 914307 Query 104382 TATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTT 104441 | ||||| ||||| ||||| || ||||| |||||||| || ||||| || | | ||||| Sbjct 914306 TGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTT 914247 Query 104442 GATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGC 104501 | || || || || || |||||||| || ||||| | ||| || || || | ||| ||| Sbjct 914246 GGTCTGGTGGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTGTCGG 914187 Query 104502 TAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| |||||||| || || ||||||||||| | || || ||||| || ||||| Sbjct 914186 ACGATTCCACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTCACAAAAATTTGCAT 914129 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | |||| |||||| || ||||| || || || || ||||| Sbjct 914130 ATACCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCG 914071 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| ||||| || ||||| |||||||| || ||||| || | | |||||| || || Sbjct 914070 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 914011 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||| || ||||| | ||| || || || | ||||||| | ||| Sbjct 914010 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913951 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || ||||||||||| | || || ||||| || ||||| Sbjct 913950 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913901 Score = 140 bits (154), Expect = 7e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || | || | || || || || || || || ||||| Sbjct 913446 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913387 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| ||||| || ||||| |||||||| || ||||| || | | |||||| || || Sbjct 913386 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913327 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||| || ||||| | ||| || || || | ||||||| | ||| Sbjct 913326 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913267 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 |||||||| || || ||||||||||| | || || || || || ||||| |||| Sbjct 913266 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCATATTGT 913212 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || | || | || || || || || || || ||||| Sbjct 913674 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913615 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| ||||| || ||||| |||||||| || ||||| || | | |||||| || || Sbjct 913614 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913555 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||| || ||||| | ||| || || || | ||||||| | ||| Sbjct 913554 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913495 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || ||||||||||| | || || ||||| || ||||| Sbjct 913494 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913445 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || | || | || || || || || || || ||||| Sbjct 913902 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913843 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| ||||| || ||||| |||||||| || ||||| || | | |||||| || || Sbjct 913842 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913783 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||| || ||||| | ||| || || || | ||||||| | ||| Sbjct 913782 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913723 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || ||||||||||| | || || ||||| || ||||| Sbjct 913722 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397057541428