Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3 197 2e-45 seq5 132 6e-26 seq1 107 2e-18 >seq3 Length=1031415 Score = 197 bits (218), Expect = 2e-45 Identities = 382/564 (68%), Gaps = 26/564 (5%) Strand=Plus/Minus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATT--A 6756 |||||| || |||||||| | | ||||||||||| ||||| |||||| | ||| | Sbjct 62218 TGGATGTGGGTTATAATCAGAAATCTCAAAATCTTCTAATTTGAAATCA--TCAATGGAA 62161 Query 6757 TCAGACtttttttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTTAATTGTTCT 6816 || |||| | | | | ||| | || ||| | | | || | ||| ||| ||| Sbjct 62160 TCCACCTTTCTAGTGATTTTTAAAGTCGGGAAAGATCTAGGTTCTCTACTTATTTGCTCT 62101 Query 6817 TTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCA 6876 || | ||| | ||||| ||| ||| | ||||||||| || | || ||||| |||||| Sbjct 62100 TTCAAAGCATCAATATGGTCTCTATACACATGAGCATCACCCAATGTGTGAATGAATTCA 62041 Query 6877 CCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACA 6936 || |||| |||||| ||| || ||||| | | ||||| | || || ||||| | Sbjct 62040 CCGGGTTCCATATCGACAATATGTGCAATCATAATGGTTAACAGAGCGTATGAAGCAATG 61981 Query 6937 TTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATA 6996 ||||| || ||||| | |||||||| ||||||||||| | |||| ||||| | Sbjct 61980 TTAAATGGAACACCAAGGCCCATATCACAAGATCTTTGATATAAAAGACATGATAA--TT 61923 Query 6997 TTG-----------TCTATAG---------CATAAAATTGACACAATACATGACATGGAG 7036 ||| || ||| |||||||||| | || ||||||||||||| Sbjct 61922 TTGGTTTCCCACCTTCCTTAGGGAAATTAACATAAAATTGTGAGAAGACATGACATGGAG 61863 Query 7037 GTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCAT 7096 ||||| | || | |||| ||| ||||||||| |||| | || | |||||| | Sbjct 61862 GTAAAGCCATTTGGGGGAAGTCAGGTGGGTTCCAAGCACTCATGATGATTCTTCTATCGT 61803 Query 7097 TTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCAT 7156 ||| || |||| | ||| ||||| ||| |||||||| | ||| || || | Sbjct 61802 ATGGGTTATTTTTCAGTTTGAATATAACATCTTGCAATTGATCCACACCTTGTCCGGTGT 61743 Query 7157 AATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAG 7216 | | | || || | |||| || || ||||||||||||||||| |||||||||| | Sbjct 61742 AGTCATCATCGCACGTCTTATATTTGGCACCAAAATGTCTCCATTGGAACCCATAAACTG 61683 Query 7217 GACCTAAATCACCTTCTTCACGAT 7240 |||||| ||||||||| ||||| Sbjct 61682 GACCTAGATCACCTTCACGACGAT 61659 >seq5 Length=938760 Score = 132 bits (146), Expect = 6e-26 Identities = 391/596 (66%), Gaps = 24/596 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || ||||| || | || || ||||| ||||| ||||| | ||||| ||| || Sbjct 282146 AAATTTGAGGATTTAGGTGTTGGTGGTTTAGATAAGGAATTCACCAAAATTTTTAGAAGA 282087 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 |||||||| |||| | ||| | || |||||||||| || ||| | Sbjct 282086 GCATTTGCAAGTAGAATTTTCCCTGCTTCTGTCATTGAAAAATTAGGTATTACCCATGTT 282027 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | ||||| ||| || || ||| |||||||| ||||| ||| || ||| Sbjct 282026 AAAGGGTTGCTATTATTTGGTCCACCAGGTACTGGTAAAACTTTAATTGCTAGAAAAATT 281967 Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | ||| | | || ||| || || ||| || || ||||| |||||| | || | Sbjct 281966 GGT-AAGATGCTGAA-CGCAAAGGAACC--TAAGATCGTCAATGGGCCTGAAATCTTAAG 281911 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 ||||| || ||| || |||| || || | || || || | || ||||||| || Sbjct 281910 TAAATACGTGGGTTCTTCTGAAGAAAACATTCGTAATTTATTCAAAGATGCTGAAGCTGA 281851 Query 164694 ACAAAAGA--AAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGAT 164751 | | ||| ||| ||| | | ||| ||| ||||| | |||||||| | ||| Sbjct 281850 ATATAAGGCCAAG--GGTGATGAATCTTCATTGCATATTATTATCTTTGATGAATTGGAT 281793 Query 164752 GCTCTTTGCAAAAAACGTGGT---------GATAATATTATTCATGATG-CAGTG--GTT 164799 || ||| |||| || | ||| ||| | | | || || || || ||| Sbjct 281792 TCTGTTTTCAAACAAAGAGGTTCCAGAGGTGATGGAACTGGTGTTGGTGACAATGTTGTT 281733 Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859 ||||| || | ||||||| ||||||||||| || || |||||| || || | ||| Sbjct 281732 AATCAATTATTAGCTAAAATGGATGGTGTAGACCAATTGAACAATATTCTAGTTATCGGT 281673 Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919 |||||||| || |||||||||||| ||||||||||||| || ||| |||| ||| | Sbjct 281672 ATGACCAATCGTAAAGATTTAATTGATAATGCTTTATTACGTCCAGGTAGATTTGAAGTA 281613 Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 || | ||||| ||||| || || || | || |||||||| || |||| Sbjct 281612 CAAGTTGAAATTCATTTACCTGATGAACCTGGCAGACTACAAATTTTTGAAATTCA 281557 >seq1 Length=1159276 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| ||||| ||||||||||| | || |||||| || || |||||| | ||||| Sbjct 898866 AAATTGGTGACAAGTTTGCTTCCCGTCATGGTCAAAAGGGTACTATTGGTATCACTTATC 898807 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 || |||||||||||| |||||| || ||||| || || ||| | || ||||| |||| Sbjct 898806 GTAGAGAAGATATGCCATTTACTTCTGAAGGTATCGTTCCTGATTTAATCATTAATCCAC 898747 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 ||||| ||||| ||| ||||| Sbjct 898746 ATGCTATTCCATCTCGTATGAC 898725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871322195600