Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4 306 4e-78 seq11 152 6e-32 >seq4 Length=966351 Score = 306 bits (338), Expect = 4e-78 Identities = 690/1024 (67%), Gaps = 41/1024 (4%) Strand=Plus/Minus Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271 ||| |||| |||||| | ||| | |||| |||||||||||| | ||| | |||||| || Sbjct 542498 CATGAATAAATCTGGAACCCATAAAGCTGGAAATAAATCCCTGGCTCTAATTTCTTCTTT 542439 Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 ||| |||| || ||| ||||| || || | ||||| |||||||||||||||||||| Sbjct 542438 ACCATGATTCTTTCTAATTTCAATGAAATCAAAGATATCTGCATGCCATGGTTCTAAATA 542379 Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391 || || | ||||||||| || ||||| |||||||| | ||| | | || ||||| Sbjct 542378 AATCGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGAGGTGTTGTT 542319 Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451 | || | | |||||| | |||||||| || ||||||| || || | ||||||| Sbjct 542318 GAAGACACGGATCATTGGAATGATACCATTAGAAGTACCATTTGTACCAGCAATATAAGA 542259 Query 48452 TCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 || | | | ||||| ||| || || ||| | |||||| || ||||||| || | Sbjct 542258 ACCTGTGGAACGAATATTGTGAATATGTAA-ACCAACACCACCAGCAGTTTTAGAAATCA 542200 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570 |||||| ||| | |||||| |||| ||||| || ||||||| ||||| | || Sbjct 542199 TAGCACATTCTTTTAATGTATCAAAAATCCCTTCGATGGAATCATCTTTCATAGCGATTA 542140 Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630 |||||| |||||||| || | ||| || | ||||||||| ||||| || || | Sbjct 542139 AGAAACAAGAGGACATTTGAGGCTTGGGAGTACCAGCATTAAATAAAGTTGGTGACGCGT 542080 Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690 || | || || | || | || ||||| || | ||||||||||| ||||| | Sbjct 542079 GAGTGAAATATCTTAAAGACATTAAGTTATAAGTCTTTATAACAGAATCGATATCGTCTA 542020 Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750 ||||||||||| | || | ||| | | || ||| || | ||| |||| || || Sbjct 542019 AATGTATACCTAAGGCGACTCTCATAACTAAATGTTGTGGACGTTCGACAACCTTCCCAT 541960 Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGT 48810 || | || | ||| || ||| ||||| || |||||||||||||| || ||| | | Sbjct 541959 CAATCCTTAATAAATAAGAACGTTCTAATGTCTTGAAACCAAAATAGTTATAAGAATAAT 541900 Query 48811 CGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATG-TTTATATACTACATCCATT 48869 | | || | | ||| | || |||| ||||| || || ||| || | ||| Sbjct 541899 CTCTGTCGTAGACAATGGTAGAGTTTAGAAGATCCTTGTGCTTCATA-ACAATATCATAG 541841 Query 48870 ACATTTTTTGATATAATTG----ATTCCT-----TGTAAAGAT-------CTTCTACAAC 48913 ||| | || || |||| || || || | ||| | ||||| Sbjct 541840 ACACGATCAGAAATCATTGGCGCATGTCTACCAGTGGATGGATTAACCCAATGATACAA- 541782 Query 48914 ATC----ACTA------AATAtttttt--ttGTTTCTTTATGAAGATTAGATATAGATAT 48961 ||| |||| || ||| ||| | || | ||| || || ||||| || | || Sbjct 541781 ATCAGAAACTACTTGTGAAAATTGTTTAGTGGTCTGTTTGTGTAGGTTAGAAATTGCTAA 541722 Query 48962 TCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA--CTAGATATTTCT 49019 |||||||||||| || ||||||||||||| || || || ||| || || | | |||| Sbjct 541721 TCTAGCAGCTAAAGTACCATAATCTGGATGTATGGTAGT-CATATAAGCT-GCTGTTTCA 541664 Query 49020 GCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAA--CTT 49077 || ||||| |||||||||| ||||| |||||| ||||| || ||||| ||| Sbjct 541663 GCAGCTAAGTTATCTAATTCGGCAGTAGAGACACCTTCGTATATACCAGAAATAATTCTT 541604 Query 49078 TCATTGCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttA 49137 | | | | || || | ||| ||| | || |||||||||||| ||||| | | Sbjct 541603 TGA--GTCACCTTAACAGCATCGATACGTTCTGGATCCAGTCCATAGCATAAACGGGTAA 541546 Query 49138 TTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAACAA 49197 |||| || |||||||| ||||| | | |||||||| || || | ||| ||||| | Sbjct 541545 TTCTTGAAGTAATTTTGTCAAAACGGACAGGTTCTTTACGGCCATCTCTTTTAATAACGA 541486 Query 49198 ACAT 49201 |||| Sbjct 541485 ACAT 541482 >seq11 Length=632489 Score = 152 bits (168), Expect = 6e-32 Identities = 488/754 (65%), Gaps = 7/754 (1%) Strand=Plus/Plus Query 47886 GATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACAT 47945 || |||| |||||| ||||| || | | | | ||||| | |||||| |||| Sbjct 177121 GAGGCTAAATTACAAACAGCAGTTTCTTCAGCGTCGGAATATTCGACAATTTCACAACAT 177180 Query 47946 AGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005 | ||| | |||| |||||||||||||| | |||||| | ||||| || || Sbjct 177181 AAATTCGAAGATTTAATAGTACCCAAATTCTTTTGATTAGATTTTTCATTACAAGCATCT 177240 Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA 48065 || || | || || || || |||||||| | |||| ||| | |||||| | ||| | Sbjct 177241 TTATAGATGATGAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAGATAGAATACCATAAT 177300 Query 48066 GTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTATATAACT 48123 | ||| || ||| || || | | || |||||| || ||||| || Sbjct 177301 TTTTGAGCTTTGATAGT--CT-TACCACGACCTTCTCTTTCGTAACGTTCGTATAATTCT 177357 Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183 || ||||| | || || || || ||||| || ||| || | ||| | | || | Sbjct 177358 TCG--AATTCTTTACCGTAGACGTTTTCTAAACCTGGAGCAGCACTTGGAGAGAACAGAG 177415 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243 ||| || | | | || || | |||| |||| |||||||| ||| | ||| | Sbjct 177416 TCCATTCACCGTTAGATTCCACACGTTTCATGAATAAATCTGGTACCCATAAAGCAGGGA 177475 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 | | ||| |||| ||| | |||||| || ||| ||| || ||| || | || || | Sbjct 177476 AAAGATCTCTAGCTCTAATTTCTTCTTTACCATGATTTTTTCTAATATCGATGAAATCGA 177535 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 ||||| |||||||||||||| | ||||| || | ||||||||| || ||||| | Sbjct 177536 AGATATCCGCATGCCATGGTTCAAGATATAGAGCAAAGGCACCTGGTCTCTTGTTACCAC 177595 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 ||||||| | || | || || ||||| | ||||| | |||||| | | || || | Sbjct 177596 CTTGATCGACGTAACGAGCGGTGTTGTTGAAGACTCTAACCATTGGAATCAACCCGTTAG 177655 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATAC 48483 | |||| || || || | ||| || ||| | | | | ||| || | || Sbjct 177656 AAGTACCGTTAGTCCCGGCAATGTAGGACCCAGTGGAACGGACGTTAGAGATATGTAGAC 177715 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 | || ||||| || | || || || | |||||| ||| | || |||||||| |||| Sbjct 177716 CGATCCCACCGGCAGTCTTTGAGATCATAGCACATTCTTTCAAAGTGTCATAAATACCTT 177775 Query 48544 CTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTC 48603 | || |||||| |||| | || |||||| ||||||||| ||||| ||| | Sbjct 177776 CGATGGAGTCATCTTTCATGGCGACTAAGAAACAAGAAGACATTTGTGGATGTGGAGTCC 177835 Query 48604 CTGAATTAAATAATGTTGGAGATGCATGAATAAA 48637 | | || || | ||||| || ||||| || || Sbjct 177836 CCGCGTTGAAAAGGGTTGGGGAAGCATGGATGAA 177869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108160601240