Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq14 212 1e-49 seq10 188 1e-42 seq3 172 1e-37 seq4 145 1e-29 >seq14 Length=553263 Score = 212 bits (234), Expect = 1e-49 Identities = 373/540 (69%), Gaps = 5/540 (1%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || || || ||| | |||||||| || || || || || |||| || || Sbjct 155271 TTTTGATAATCGGAGACTCTCTTTTCGAAGAAATTGGTCTTACCAGCTAAAGAGATATTT 155212 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAA 38950 | ||| ||||| |||||||||| | ||| | |||| | | || | | | | ||| Sbjct 155211 TCCATGAAATCGAATGGATTTTCGACGTTAAAGAATTTCT-TATTACCGAAAGCGACTAA 155153 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| || || |||||||||||||| |||||| ||| ||||||||| ||||| Sbjct 155152 TAATCTATCAGCAACGAATTCAACATATTGATTCATTAAATCAGCATTCATACCTAATAA 155093 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070 | |||||| ||||| || | || |||||| ||||| ||||||| | |||| || Sbjct 155092 AGCGACTGGTAAAGCATCGATAAAATATCTTTTTTCAATTTCAACAGCTTCTGTAATAAT 155033 Query 39071 cataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATGC 39130 | || | | || | ||||| ||| | |||| || | || | ||| || Sbjct 155032 TTTTTCTACAACAGCTTGGTCTGGTTTATGTTTTAAATGA---GCGAAAAGAAGACAAGC 154976 Query 39131 AAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 39190 ||||| |||||||||||||| || ||| | || ||||| || |||||||| ||||| Sbjct 154975 GAAATCGGTATGTAAACCTTCATCTCTACAAATCAATTCGTTGGAGAAAGTTAAACCTGG 154916 Query 39191 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 39250 ||| || ||||| || || | |||||| || || |||||| || || ||||| | ||| Sbjct 154915 CATCAACCCTCTTTTCTTTAACCAAAAGATGGAAGCAAAAGAACCTGAGAAGAAGACACC 154856 Query 39251 CTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCA 39310 || | || || || | || |||| | |||| | || | |||| |||||| Sbjct 154855 TTCAATGGCAGCGAAAGCAACTAATCTTTCAGCAAAGACGGTTTCACTATCTTGAATCCA 154796 Query 39311 ATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370 | | ||||| || ||||||| ||| || ||| ||| |||| ||||| |||| ||| Sbjct 154795 TCTAAGAGCCCATTCAGCTTTTTCTTTAATTTGAGGGATAGTTTCGATAGCATTAAGTAA 154736 >seq10 Length=639015 Score = 188 bits (208), Expect = 1e-42 Identities = 185/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || ||| |||||||||||||| | || || || || Sbjct 8878 TTCTTACCACCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTG 8819 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || ||||||| || | || || ||||| ||||||||||| |||||||| |||||| Sbjct 8818 TAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGG 8759 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || |||||||| ||||| || ||| || ||||| ||||| || || Sbjct 8758 TCAGGTGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCAGAA 8699 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||||| |||||||| ||||||||||| ||||||| || || |||||||| Sbjct 8698 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATTTT 8640 >seq3 Length=1031415 Score = 172 bits (190), Expect = 1e-37 Identities = 171/220 (78%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || ||||||||||| |||| || || || ||||| Sbjct 37103 ATGATACCACCTCTTAATCTCAAAACTAAATGTAA-GTAGATTCCTTTTGGATGTTATAG 37045 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||||| || |||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct 37044 TCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCA 36985 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| |||||||| || ||| || |||||| || || || || ||| Sbjct 36984 GGTGGAATACCTTCCTTATCTTGAATCTTAGACTTAACATTATCAATGGTGTCAGAAGAT 36925 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || ||||||| |||||| || |||||||| || || |||| Sbjct 36924 TCAACTTCTAAAGTAATAGTCTTACCAGTCAAAGTCTTAA 36885 >seq4 Length=966351 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| |||||||||||||| | || || || || || || Sbjct 914130 ATACCACCTCTTAATCTTAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCG 914071 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| ||||||||| ||||| || || | ||||||||| ||| Sbjct 914070 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 914011 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || || ||| || || || ||||| |||||||| Sbjct 914010 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913951 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || ||||| |||||||| || || || | || || ||||| Sbjct 913950 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913901 Score = 141 bits (156), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||| | ||| || || || || || Sbjct 913446 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913387 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| ||||||||| ||||| || || | ||||||||| ||| Sbjct 913386 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913327 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || || ||| || || || ||||| |||||||| Sbjct 913326 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913267 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 || ||||| || ||||| |||||||| || || |||| ||| || ||||| || || Sbjct 913266 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCATATTGTT 913211 Score = 141 bits (156), Expect = 2e-28 Identities = 171/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 ||||| |||||||| | || ||| |||||||||||||| | || || || || || Sbjct 914361 ATAATCCCACCTCTTAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAG 914302 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| | || | || |||| ||||||||| ||||| || || | ||||||||| Sbjct 914301 TCGGATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCT 914242 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || || ||||||||||| || || ||| || || || || || |||||| Sbjct 914241 GGTGGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTGTCGGACGAT 914182 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || ||||| |||||||| || || || | || || ||||| Sbjct 914181 TCCACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTCACAAAAATTTGCAT 914129 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||| | ||| || || || || || Sbjct 913674 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913615 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| ||||||||| ||||| || || | ||||||||| ||| Sbjct 913614 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913555 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || || ||| || || || ||||| |||||||| Sbjct 913554 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913495 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || ||||| |||||||| || || || | || || ||||| Sbjct 913494 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913445 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||| | ||| || || || || || Sbjct 913902 ATACCACCTCTTAGTCTCAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 913843 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| ||||||||| ||||| || || | ||||||||| ||| Sbjct 913842 GATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAGATCAAACGCTGTTGGTCTGGT 913783 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || || ||| || || || ||||| |||||||| Sbjct 913782 GGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTGTCGATGGTATCGGACGATTCC 913723 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || ||||| |||||||| || || || | || || ||||| Sbjct 913722 ACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 913673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134970407800