Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4 239 1e-57 seq11 212 1e-49 seq14 159 8e-34 seq3 122 2e-22 >seq4 Length=966351 Score = 239 bits (264), Expect = 1e-57 Identities = 577/864 (67%), Gaps = 12/864 (1%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||||||||||||||| || | |||||| |||||||| | | | |||| || | Sbjct 541912 ACTATTTTGGTTTCAAGACATTAGAACGTTCTTATTTATTAAGGATTGATGGGAAGGTTG 541971 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 | |||||||| ||||| | || | | || || | ||||| ||| | | ||||| Sbjct 541972 TCGAACGTCCACAACATTTAGTTATGAGAGTCGCCTTAGGTATACATTTAGACGATATCG 542031 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480 | ||||||| | |||| | || | | || || | | | ||| || | || Sbjct 542032 ATTCTGTTATAAAGACTTATAACTTAATGTCTTTAA-GATATTTCACTCACGCGTCACCA 542090 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAAT 110539 || ||||||| || || ||| ||| || | ||||| |||||| | | || Sbjct 542091 ACTTTATTTAATGCTGGTACTCCCAAGCCTCAAATGTCCTCTTG-TTTCTTAATCGCTAT 542149 Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599 || |||||||| || ||||| |||| |||| | | |||||| |||| | |||||||| Sbjct 542150 GAAAGATGATTCCATCGAAGGGATTTTTGATACATTAAAAGAATGTGCTATGATTTCTAA 542209 Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 || |||| || ||||| | || |||| ||||||| || | ||| | |||| || Sbjct 542210 AACTGCTGGTGGTGTTGGTTTACATATTCACAATATTCGTTCCACAGGTTCTTATATTGC 542269 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | || ||| |||| | ||| | |||||||| | | ||||||||| |||| | Sbjct 542270 TGGTACAAATGGTACTTCTAATGGTATCATTCCAATGATCCGTGTCTTCAACAACACCTC 542329 Query 110720 AAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 ||||| ||||||||||| |||||| || | ||||| || ||| | ||||| Sbjct 542330 TCGTTATGTCGATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCGATTTATTTAGAACC 542389 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 |||||| ||||||| ||||| ||| | ||| || | || ||||| || |||||| Sbjct 542390 ATGGCATGCAGATATCTTTGATTTCATTGAAATTAGAAAGAATCATGGTAAAGAAGAAAT 542449 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 ||||| | ||||||||| || | ||| || |||||||||||||| ||||||| | Sbjct 542450 TAGAGCCAGGGATTTATTTCCAGCTTTATGGGTTCCAGATTTATTCATGCAACGTGTGGA 542509 Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956 || || || ||| || | | | ||| | | |||| || | || ||||| || Sbjct 542510 AGCCAACGGTGACTGGACTTTATTTTCTCCAACTGATGCTCCAGGCTTGTCCGATGTTTA 542569 Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACA 111016 || ||||||| || | | || || ||||||| |||||||| | | ||||| Sbjct 542570 CGGTGAAGAGTTCAAAAAGTTATATGAGCGTTATGAAAGAGAAGGCAGGGGT--CAAACT 542627 Query 111017 AATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075 | || | ||||| || | |||| || | ||| | || ||||||||| |||| Sbjct 542628 A--TCAAGGCTCATAAATTATGGTATGCTATATTAGAAGCCCAGACTGAAACTGGTACTC 542685 Query 111076 CTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAA 111135 | | | || | ||||| ||| | |||| || ||||| |||| ||| ||||| || | Sbjct 542686 CCTTTGTTCTTTATAAGGATGCTTGTAATGAGAAGTCTAACCAAAAGAACTTAGGTACTA 542745 Query 111136 TTAAGTCTAGTAATTTGTGCTGTG 111159 |||| ||| ||| || || |||| Sbjct 542746 TTAAATCTTCTAACTTATGTTGTG 542769 Score = 138 bits (152), Expect = 3e-27 Identities = 432/662 (65%), Gaps = 48/662 (7%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943 ||||||| |||| | || || | ||||||||||| ||||| || || | || ||| Sbjct 601575 TTACAATTTCATGTCGCTACCTATATGGATAATGATATTGCAGGTCAACCA--CAAGCAC 601632 Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003 ||||| ||| || | ||| | || |||| | || | || |||||||| |||| Sbjct 601633 TTCAAAAATCCGGTCGTCCTGTTAAATCTATTCGTGCTCGTTTAAAGGGTAAAGAAGGTC 601692 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACAC 305063 |||| |||||||| ||||||| || |||||||||||| |||||||| || ||| | Sbjct 601693 GTATCAGAGGTAATTTAATGGGTAAGCGTGTTGATTTTTCTGCAAGAACAGTTATCTCTG 601752 Query 305064 CTGATTCTCAAATTAGTCTTC-ATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTA 305122 |||| | ||| || | || || || | || ||||||| |||||| || ||| Sbjct 601753 GTGATCC-CAATTTGGATTTAGATCAAGTTGGTGTTCCAAAGTCTATTGCTAGAACTCTA 601811 Query 305123 ACATTTCCAGAGAAAGTTAACGAGAAAAATATTAAACATTTGAGACGTTGTGTTCTTAAT 305182 || | ||||| |||| | || ||| | | ||| | || | || | |||| Sbjct 601812 ACTTACCCAGAAGTTGTTACTCCATATAACATTGACCGTTTAACACAATTAGTCCGTAAT 601871 Query 305183 GG---AAATAGCAAGTATCCAGGTGCTCGTGCTGTTATAAAACACAAGCAAAAGAAGACA 305239 || |||| | ||||||||||| |||||| |||| Sbjct 601872 GGTCCAAATG---AACATCCAGGTGCTAAATATGTTATTCGT--------------GACA 601914 Query 305240 ATATCTTTGAACCATATCGATTTAAAACAATTCAGTAAAAT-GCT--TGAAATT-AATGA 305295 || ||| | ||| ||||||| | | ||||||| ||| ||| ||| ||| | Sbjct 601915 ATGG---TGATCG-TATTGATTTAAGATAT---AGTAAAAGAGCTGGTGATATTCAATTA 601967 Query 305296 TATTGTTATCAGACATTTGAATG-----------ACAATGATTGGGTTCTGTTCAATAGG 305344 | | | | || | ||||| | |||||||| ||| | |||||| | Sbjct 601968 CAATATGGTTGGAAAGTTGAACGTCATATTGTCGACAATGATCCAGTTTTATTCAATCGT 602027 Query 305345 CAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTG 305404 ||||| || | ||||||||||| |||||||| |||| |||||| || | || | Sbjct 602028 CAACCTTCTTTACATAAAATGTCAATGATGGCACATAGAGTCAAGGTTGTCCCTTATTCT 602087 Query 305405 ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAA 305464 || ||| |||||||| | | | | ||||||||||| ||||||||||| |||||| Sbjct 602088 ACTTTTAGATTAAATCTTTCCGTCACTTCTCCTTATAATGCCGATTTTGATGGTGATGAA 602147 Query 305465 ATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAATTATCAGAAATATGTTCT 305524 |||||| | ||||| || ||||| | | || | |||||||||| || ||||| || Sbjct 602148 ATGAATTTACATGTTCCACAATCTGAAGAGACTAAAGCTGAATTATCTCAATTATGTGCT 602207 Query 305525 GT 305526 || Sbjct 602208 GT 602209 >seq11 Length=632489 Score = 212 bits (234), Expect = 1e-49 Identities = 578/869 (67%), Gaps = 22/869 (3%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| || || ||||||||| | |||||| | ||||||||| | | || || | || Sbjct 178030 ACTACTTCGGGTTCAAAACTTTAGAACGTTCCTATTTACTTAGACTTAACGGTAAAGTCG 177971 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||||||| ||||| | | | | || || || |||||||| || ||||| Sbjct 177970 CCGAACGTCCACAACATCTTATCATGAGAGTCGCCATCGGTATTCACGGTAGAGATATCG 177911 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAA-AAGAAAGCT-ATTCATGCTACTCC 110479 || | | ||| |||| | || | || |||| | | || |||||| | || Sbjct 177910 CCGCCGCATTAGAAACTTATAACTTAAT--GTCCTTAAGATACTTCATCCATGCTTCCCC 177853 Query 110480 TACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAA 110538 ||||| || ||||| || ||| |||| || ||||||| |||||| | | | Sbjct 177852 AACCCTTTTCAACGCGGGGACTCCACATCCACAAATGTCTTCTTG-TTTCTTAGTCGCCA 177794 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTA 110598 | || ||||| || || |||||||||||||| || | |||||| |||| | || || | Sbjct 177793 TGAAAGATGACTCCATCGAAGGTATTTATGACACTTTGAAAGAATGTGCTATGATCTC-A 177735 Query 110599 AAAACT-CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || ||| | || || || ||| | || | | | | || || | || | | || Sbjct 177734 AAGACTGCCGGTGGGATCGGTCTACATATCTCTAACGTCCGTTCCACTGGGTCCTACATT 177675 Query 110658 GCAACAGCGAAGGGTGCTTC-AACTGGACTTG-TTCCAATGTTAAGAGTCTTCAACGACA 110715 || | || ||| |||| ||| || ||| |||||||| | |||||||||||| ||| Sbjct 177674 GCCGGGACTAACGGTACTTCTAACGGG--TTGATTCCAATGGTTAGAGTCTTCAACAACA 177617 Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCG 110772 | || || || ||||||||||||| |||| || | |||||| | ||||| | Sbjct 177616 CCGCTCGTTACGTCGATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCTCTATATCTTG 177557 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 |||| |||||| | ||||| || || ||| | || || | |||||||| || |||| Sbjct 177556 AACCATGGCATGCGGATATCTTCGATTTCATCGATATTAGAAAAAATCATGGTAAAGAAG 177497 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || ||||| | ||| | || ||| | ||| | ||||||||||||||||||||| Sbjct 177496 AAATTAGAGCTAGAGATCTTTTCCCTGCTTTATGGGTACCAGATTTATTCATGAAACGTG 177437 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 | || || || ||| |||| | | ||| | | |||| ||| || | | Sbjct 177436 TGGAATCTAACGGTGAATGGACTCTGTTCTCTCCAAGTGCTGCTCCAGGTTTAGAAAACG 177377 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG- 111010 | || || ||||| || ||||| | |||||| || |||| |||||| | | | | Sbjct 177376 TCTACGGTAAAGAATTCGAAGAATTATACGAACGTTACGAAAGAGAAGGTCGTGGTAAGA 177317 Query 111011 CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070 | | ||| ||||||| || | |||| ||| | ||| | ||| ||||||||| Sbjct 177316 CTATCAA-----AGCTCAAAAATTATGGTATTCTATCTTAGAAGCTCAAACTGAAACTGG 177262 Query 111071 AACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 ||||| | || | ||||||||| | |||| ||||||||||||| |||||| || Sbjct 177261 TACTCCATTCATCATCTATAAAGATGCTTGTAATGAAAAATCTAATCAAAAGAATTTGGG 177202 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || ||||| ||| ||||| || |||| Sbjct 177201 TACTATTAAATCTTCGAATTTATGTTGTG 177173 >seq14 Length=553263 Score = 159 bits (176), Expect = 8e-34 Identities = 501/768 (65%), Gaps = 15/768 (2%) Strand=Plus/Plus Query 131423 CGTTACACCCTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTT 131482 ||| ||||| | || ||||| ||| || |||| | | | || |||| | ||| Sbjct 154391 CGTCACACCGTCTTCCCAATCAAATATAACGAAATCTGGCAAGCATACAAGAGAGCTGAA 154450 Query 131483 GCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAA- 131541 || | |||||||| | |||||| |||||| | || ||| | | |||||| | || Sbjct 154451 GCCTCTTTCTGGACCGCTGAAGAAATCGATTTAGGTAAGGATTTACACGATTGGAACAAC 154510 Query 131542 ---ATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAG 131598 || || | || ||||| ||| | || | ||||||||| |||||||| | Sbjct 154511 AGAATGAATCCA-AACGAAAAGTTCTTTATCTCTAGAGTTCTTGCCTTCTTCGCTGCCTC 154569 Query 131599 TGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGA 131658 |||||| |||||| |||||| | || |||||| | ||| || |||| ||||| Sbjct 154570 TGATGGTCTTGTTAACGAAAATTTAGTCGAAAATTTCTCTGCTGAAGTTAATATCCCTGA 154629 Query 131659 AGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTC 131718 || | | | |||||| || ||| | ||||| |||||| || | ||||| Sbjct 154630 AGCTAAAGCATTCTACGGGTTCCAAATCATGATTGAAAACATTCATTCTGAAACCTATTC 154689 Query 131719 ATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGA-TAAAAATAAATTATTTGATGCTG 131777 | || || || | | ||||| || | | || | ||| ||| || ||||| Sbjct 154690 TCTTTTAATCGATACATATATTAAAGATCCAAAGGAATCCGAATTC-TTACTTAATGCTA 154748 Query 131778 TAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGA-- 131835 | | | | ||| ||||||| | ||||| ||||||||| ||| |||||||||||| Sbjct 154749 TCGAAACTATCCCTCAAATTAAAGAAAAAGCTGAATGGGCTCTTAGATGGATTCAAGATA 154808 Query 131836 -TGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCT 131894 ||| ||| ||| || |||| | || ||||| ||| |||||||| | |||| Sbjct 154809 GTGAAACCG---TCTTTGCTGAAAGATTAGTTGCTTTCGCTGCCATTGAAGGTGTCTTCT 154865 Query 131895 TTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCT 131954 | |||||| |||| | | ||||||||| | ||||| | || |||||||| || | Sbjct 154866 TCTCAGGTTCTTTTGCTTCCATCTTTTGGTTAAAGAAAAGAGGGTTGATGCCAGGTTTAA 154925 Query 131955 CATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAA 132014 | || ||||| |||| || | |||||||||| || ||||| || || ||| | | Sbjct 154926 CTTTCTCCAACGAATTGATTTGTAGAGATGAAGGTTTACATACCGATTTCGCT-TGTCTT 154984 Query 132015 TCTATAGAAAATTT-GCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAA 132073 | | | |||| |||||| || || | | | || || |||| | ||| Sbjct 154985 CTTTTCGCTCATTTAAAACATAAACCAGACCAAGCTGTTGTAGAAAAAATTATTACAGAA 155044 Query 132074 GCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATG 132133 || ||||| || || || | | ||| || ||||| || | ||| | || ||| Sbjct 155045 GCTGTTGAAATTGAAAAAAGATATTTTATCGATGCTTTACCAGTCGCTTTATTAGGTATG 155104 Query 132134 AATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181 |||||||| | ||||| | || ||||||||||||||||| | ||| Sbjct 155105 AATGCTGATTTAATGAATCAATATGTTGAATTCGTTGCTGATAGATTA 155152 >seq3 Length=1031415 Score = 122 bits (134), Expect = 2e-22 Identities = 215/316 (68%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 167636 AAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTA 167695 ||| ||||||||||||| |||||| || || | || |||| || |||||||| || Sbjct 930399 AAAGACATCGATGAAACATTTCCATATCTTAGTAGATTTCCGTCTCTTACATTCATCATA 930458 Query 167696 AAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTT 167755 |||||||| | | | | || ||| |||| ||||| |||||||| | || | ||| Sbjct 930459 GAAACCATACATTTTGGTTACATTGGCAGATTCATGATTACCTCTTAACATAAAGAAGTT 930518 Query 167756 ATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACC 167815 | | | || || |||| ||||| || || || || |||| || Sbjct 930519 ACCTTTATATTTAATCTTATAACATAATAGTAACATGATAGTCTCCAAAGATTGTTGTCC 930578 Query 167816 TCTATCAACATAATCACCTAAAAATATATATTTATTTTGGTTTGAAGGATTATCTAGTTT 167875 || ||||| ||||||||||||||||| || || ||| | || ||||| | | Sbjct 930579 TCGATCAATATAATCACCTAAAAATAAGTAATTTGTTTCG---GATGGATTCCCACTTAA 930635 Query 167876 TTTAAAAATATTCAATAAATCACTAAATTGACCATGTAAATCACCTACAACCTTTA-TGG 167934 ||| || || | ||||||||| || |||||||||| | ||||||||||| || | ||| Sbjct 930636 TTTGAAGATTCTTAATAAATCATTATATTGACCATGAATATCACCTACAATTTTAATTGG 930695 Query 167935 GACTTGTAGTTTTAAT 167950 ||||| | ||||| Sbjct 930696 TGATTGTAATCTTAAT 930711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811416250451